SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000551 |
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Gene Symbol: | VHL |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr3:g.10151991T>C | COSN2535402 | ||||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-145-5p | ttaggAACTGGAggc | GUCCAGUU | m7b | Created | HHHSE_20641_VHL|NM_198156|exon_utr3|-6.52836087231328|-0.27865004031199 |
hsa-miR-584-3p | ttaGGAACTGgaggc | UCAGUUCC | m7b | Created | HHHSE_20641_VHL|NM_198156|exon_utr3|-6.52836087231328|-0.27865004031199 |
hsa-miR-5195-3p | ttaggAACTGGAggc | AUCCAGUU | m7b | Created | HHHSE_20641_VHL|NM_198156|exon_utr3|-6.52836087231328|-0.27865004031199 |
hsa-miR-3925-3p | ttaggaACTGGAGgc | ACUCCAGU | m7b | Created | HHHSE_20641_VHL|NM_198156|exon_utr3|-6.52836087231328|-0.27865004031199 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr3:g.10141904C>T | COSM1417281 | 2146347 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4763-5p | aGGCAGGCGtcgaag | CGCCUGCC | m8a | (m8a->m7a) | HHHSE_20640_VHL|NM_000551|exon_CDS|-6.53089129561489|0.1116536576202 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr3:g.10141904C>A | COSM14364 | 972746 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6747-3p | AGGCAGGAgtcgaag | UCCUGCCU | m8a | Created | HHHSE_20640_VHL|NM_000551|exon_CDS|-6.53089129561489|0.1116536576202 |
hsa-miR-4431 | aggcagGAGTCGaag | GCGACUCU | m6b | Created | HHHSE_20640_VHL|NM_000551|exon_CDS|-6.53089129561489|0.1116536576202 |
hsa-miR-1976 | agGCAGGAGtcgaag | CCUCCUGC | m7b | (m6b->m7b) | HHHSE_20640_VHL|NM_000551|exon_CDS|-6.53089129561489|0.1116536576202 |
hsa-miR-4763-5p | aGGCAGGCGtcgaag | CGCCUGCC | m8a | (m8a->m7a) | HHHSE_20640_VHL|NM_000551|exon_CDS|-6.53089129561489|0.1116536576202 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr3:g.10141888G>GA | COSM17851 | 979560 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-937-3p | gaggtagGCGCGGAg | AUCCGCGC | m7b | Disrupted | HHHSE_20640_VHL|NM_000551|exon_CDS|-6.53089129561489|0.1116536576202 |