SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000544
Gene Symbol: TAP2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32838084GTGG>G COSM2149143 TCGA-02-2483 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4323 gagggcTGGGGCTGc CAGCCCCA m8a Created HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-4687-5p GAGGGCTGtgggggctgc CAGCCCUC m8a Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-6856-3p gaGGGCTGTgggggctgc UACAGCCC m7b (m7b->m6b) HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-4323 gagggcTGGGGCTGc CAGCCCCA m8a Created HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-4687-5p GAGGGCTGtgggggctgc CAGCCCUC m8a Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-6856-3p gaGGGCTGTgggggctgc UACAGCCC m7b (m7b->m6b) HHRBL_12311_BCBL1-2of3-SCL_809

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32838072G>C COSM3928001 tumor_4166706 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-208a-5p tgctAAAGCTaagag GAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-208b-5p tgctAAAGCTaagag AAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-329-5p tgctAAACCTaagag GAGGUUUU m6b Created HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-4464 tgctAAACCTaagag AAGGUUUG m6b Created HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-4748 tgctAAACCTaagag GAGGUUUG m6b Created HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-208a-5p tgctAAAGCTaagag GAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-208b-5p tgctAAAGCTaagag AAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-329-5p tgctAAACCTaagag GAGGUUUU m6b Created HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-4464 tgctAAACCTaagag AAGGUUUG m6b Created HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-4748 tgctAAACCTaagag GAGGUUUG m6b Created HHRBL_12311_BCBL1-2of3-SCL_809

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32838072G>A COSM3684282 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-208a-5p tgctAAAGCTaagag GAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-208b-5p tgctAAAGCTaagag AAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-208a-5p tgctAAAGCTaagag GAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-208b-5p tgctAAAGCTaagag AAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-208a-5p tgctAAAGCTaagag GAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809
hsa-miR-208b-5p tgctAAAGCTaagag AAGCUUUU m6b Disrupted HHRBL_12311_BCBL1-2of3-SCL_809

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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