SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000544
Gene Symbol: TAP2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.32837788T>A COSM4732162 T2940 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6808-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6884-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6893-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-7152-3p ccGGACCAGcctctc UCUGGUCC m7b (m6b->m7b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-940 ccggaCCTGCCTctc AAGGCAGG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-1827 ccggacCTGCCTCtc UGAGGCAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4736 ccggACCTGCCTctc AGGCAGGU m8a Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-485-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6131 ccgGACCAGCCtctc GGCUGGUC m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6808-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6884-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6893-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-7152-3p ccGGACCAGcctctc UCUGGUCC m7b (m6b->m7b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-940 ccggaCCTGCCTctc AAGGCAGG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-1827 ccggacCTGCCTCtc UGAGGCAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4736 ccggACCTGCCTctc AGGCAGGU m8a Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-485-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6131 ccgGACCAGCCtctc GGCUGGUC m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6808-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6884-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6893-5p ccggaCCTGCCTctc CAGGCAGG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-7152-3p ccGGACCAGcctctc UCUGGUCC m7b (m6b->m7b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-940 ccggaCCTGCCTctc AAGGCAGG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-1827 ccggacCTGCCTCtc UGAGGCAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4736 ccggACCTGCCTctc AGGCAGGU m8a Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-485-5p ccggacCAGCCTCTc AGAGGCUG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6131 ccgGACCAGCCtctc GGCUGGUC m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32837785C>T COSM4891871 TCGA-EE-A29E-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1827 gacCTGCCTCtcctc UGAGGCAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4434 gacctgCTTCTCCTc AGGAGAAG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4516 gacctgCTTCTCCtc GGGAGAAG m7b Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4736 gACCTGCCTctcctc AGGCAGGU m8a (m8a->m7a) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-5703 gacctgCTTCTCCTc AGGAGAAG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6808-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6893-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-940 gaCCTGCCTctcctc AAGGCAGG m7b (m7b->m6b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-1827 gacCTGCCTCtcctc UGAGGCAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4434 gacctgCTTCTCCTc AGGAGAAG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4516 gacctgCTTCTCCtc GGGAGAAG m7b Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4736 gACCTGCCTctcctc AGGCAGGU m8a (m8a->m7a) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-5703 gacctgCTTCTCCTc AGGAGAAG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6808-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6893-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-940 gaCCTGCCTctcctc AAGGCAGG m7b (m7b->m6b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-1827 gacCTGCCTCtcctc UGAGGCAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4434 gacctgCTTCTCCTc AGGAGAAG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4516 gacctgCTTCTCCtc GGGAGAAG m7b Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-4736 gACCTGCCTctcctc AGGCAGGU m8a (m8a->m7a) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-5703 gacctgCTTCTCCTc AGGAGAAG m8a Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6808-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6893-5p gaCCTGCCTctcctc CAGGCAGG m7b (m7b->m6b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-940 gaCCTGCCTctcctc AAGGCAGG m7b (m7b->m6b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32837771G>A COSM252862 OV207 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3688-5p cgTTGCCACcttctt AGUGGCAA m7b (m6b->m7b) HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6815-5p cgttGCCACCTtctt UAGGUGGC m7b Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6865-5p cgttGCCACCTtctt UAGGUGGC m7b Created HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32837769C>T COSM3625514 TCGA-GF-A3OT-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 ttgccgcCTTCTTCt AGAAGAAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-3185 ttgccgcCTTCTTCt AGAAGAAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-3185 ttgccgcCTTCTTCt AGAAGAAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178

Mutation Mutation ID Sample Name Cancer Type
chr6:g.32837759TTCC>C COSM3348947 HCT116 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 cttCTTCTTCcttgtcct AGAAGAAG m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6830-5p cttcttcTTCCTTGtcct CCAAGGAA m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-3185 CTTCTTCTtccttgtcct AGAAGAAG m8a Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6830-5p cttcttcTTCCTTGtcct CCAAGGAA m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-3185 CTTCTTCTtccttgtcct AGAAGAAG m8a Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178
hsa-miR-6830-5p cttcttcTTCCTTGtcct CCAAGGAA m7b Disrupted HHKTA_22224_NM_000544|567|606|3.28836351993354|0.505895877155178

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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