SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000523
Gene Symbol: HOXD13

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr2:g.176094623A>G COSM212277 SA214 [breast][NS][carcinoma][basal_(triple-negative)_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.176094609A>G COSM4086918 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-874-3p aacaAGGGCAagcgg CUGCCCUG m6b Created HPTA3_10793_G16988.1_176959338
hsa-miR-938 aacAAGGGCAagcgg UGCCCUUA m7a Created HPTA3_10793_G16988.1_176959338
hsa-miR-6886-3p aacAAGGGCAagcgg UGCCCUUC m7a Created HPTA3_10793_G16988.1_176959338
hsa-miR-6780b-3p aACAAGGGcaagcgg UCCCUUGU m7b Created HPTA3_10793_G16988.1_176959338
hsa-miR-676-3p aacaAGGACAagcgg CUGUCCUA m6b Disrupted HPTA3_10793_G16988.1_176959338
hsa-miR-938 aacAAGGGCAagcgg UGCCCUUA m7a Created HPTA3_10793_G16988.1_176959338
hsa-miR-874-3p aacaAGGGCAagcgg CUGCCCUG m6b Created HPTA3_10793_G16988.1_176959338
hsa-miR-6886-3p aacAAGGGCAagcgg UGCCCUUC m7a Created HPTA3_10793_G16988.1_176959338
hsa-miR-6780b-3p aACAAGGGcaagcgg UCCCUUGU m7b Created HPTA3_10793_G16988.1_176959338
hsa-miR-676-3p aacaAGGACAagcgg CUGUCCUA m6b Disrupted HPTA3_10793_G16988.1_176959338
hsa-miR-2355-3p aacaAGGACAAgcgg AUUGUCCU m7b Disrupted HPTA3_10793_G16988.1_176959338
hsa-miR-3157-3p aacaAGGGCAagcgg CUGCCCUA m6b Created HPTA3_10793_G16988.1_176959338
hsa-miR-2355-3p aacaAGGACAAgcgg AUUGUCCU m7b Disrupted HPTA3_10793_G16988.1_176959338
hsa-miR-3157-3p aacaAGGGCAagcgg CUGCCCUA m6b Created HPTA3_10793_G16988.1_176959338

Mutation Mutation ID Sample Name Cancer Type
chr2:g.176094607G>T COSM1317076 186-01-6TD [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-3p ttaacaAGGACAAgc AUUGUCCU m7b Disrupted HPTA3_10793_G16988.1_176959338
hsa-miR-676-3p ttaacaAGGACAagc CUGUCCUA m6b Disrupted HPTA3_10793_G16988.1_176959338
hsa-miR-616-3p ttaaCAATGACaagc AGUCAUUG m7b Created HPTA3_10793_G16988.1_176959338
hsa-miR-4289 ttaACAATGacaagc GCAUUGUG m6b Created HPTA3_10793_G16988.1_176959338
hsa-miR-2355-3p ttaacaAGGACAAgc AUUGUCCU m7b Disrupted HPTA3_10793_G16988.1_176959338
hsa-miR-4289 ttaACAATGacaagc GCAUUGUG m6b Created HPTA3_10793_G16988.1_176959338
hsa-miR-616-3p ttaaCAATGACaagc AGUCAUUG m7b Created HPTA3_10793_G16988.1_176959338
hsa-miR-676-3p ttaacaAGGACAagc CUGUCCUA m6b Disrupted HPTA3_10793_G16988.1_176959338

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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