SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000523
Gene Symbol: HOXD13

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr2:g.176095817A>G COSN6155608 RK202_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.176094566G>T COSM1009839 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-935 gcttaaaTAACTGGa CCAGUUAC m7a Created HPKTA_34912_G37495.1_176959281
hsa-miR-302b-5p gcTTAAAGaactgga ACUUUAAC m6b Disrupted HPKTA_34912_G37495.1_176959281
hsa-miR-302d-5p gcTTAAAGaactgga ACUUUAAC m6b Disrupted HPKTA_34912_G37495.1_176959281
hsa-miR-4277 gcttaaAGAACTGga GCAGUUCU m7b Disrupted HPKTA_34912_G37495.1_176959281
hsa-miR-5584-3p gcttaAAGAACTgga UAGUUCUU m7b Disrupted HPKTA_34912_G37495.1_176959281
hsa-miR-935 gcttaaaTAACTGGa CCAGUUAC m7a Created HPKTA_34912_G37495.1_176959281
hsa-miR-5584-3p gcttaAAGAACTgga UAGUUCUU m7b Disrupted HPKTA_34912_G37495.1_176959281
hsa-miR-4277 gcttaaAGAACTGga GCAGUUCU m7b Disrupted HPKTA_34912_G37495.1_176959281
hsa-miR-302d-5p gcTTAAAGaactgga ACUUUAAC m6b Disrupted HPKTA_34912_G37495.1_176959281
hsa-miR-302b-5p gcTTAAAGaactgga ACUUUAAC m6b Disrupted HPKTA_34912_G37495.1_176959281

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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