SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000523
Gene Symbol: HOXD13

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr2:g.176095817A>G COSN6155608 RK202_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr2:g.176094623A>G COSM212277 SA214 [breast][NS][carcinoma][basal_(triple-negative)_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.176094617C>T COSM4444752 C91 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-122-3p caagcggTGGCGTat AACGCCAU m6b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-122-3p caagcggTGGCGTat AACGCCAU m6b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891

Mutation Mutation ID Sample Name Cancer Type
chr2:g.176094614C>T COSM4691035 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6500-3p ggACAAGTGgcggcg ACACUUGU m7b (m6b->m7b) HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-6500-3p ggACAAGTGgcggcg ACACUUGU m7b (m6b->m7b) HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891

Mutation Mutation ID Sample Name Cancer Type
chr2:g.176094609A>G COSM4086918 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-3p aacaAGGACAAgcgg AUUGUCCU m7b Disrupted HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-3157-3p aacaAGGGCAagcgg CUGCCCUA m6b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-676-3p aacaAGGACAagcgg CUGUCCUA m6b Disrupted HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-6780b-3p aACAAGGGcaagcgg UCCCUUGU m7b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-6886-3p aacAAGGGCAagcgg UGCCCUUC m7a Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-874-3p aacaAGGGCAagcgg CUGCCCUG m6b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-938 aacAAGGGCAagcgg UGCCCUUA m7a Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-2355-3p aacaAGGACAAgcgg AUUGUCCU m7b Disrupted HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-3157-3p aacaAGGGCAagcgg CUGCCCUA m6b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-676-3p aacaAGGACAagcgg CUGUCCUA m6b Disrupted HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-6780b-3p aACAAGGGcaagcgg UCCCUUGU m7b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-6886-3p aacAAGGGCAagcgg UGCCCUUC m7a Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-874-3p aacaAGGGCAagcgg CUGCCCUG m6b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-938 aacAAGGGCAagcgg UGCCCUUA m7a Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891

Mutation Mutation ID Sample Name Cancer Type
chr2:g.176094607G>T COSM1317076 186-01-6TD [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-3p ttaacaAGGACAAgc AUUGUCCU m7b Disrupted HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-4289 ttaACAATGacaagc GCAUUGUG m6b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-616-3p ttaaCAATGACaagc AGUCAUUG m7b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-676-3p ttaacaAGGACAagc CUGUCCUA m6b Disrupted HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-2355-3p ttaacaAGGACAAgc AUUGUCCU m7b Disrupted HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-4289 ttaACAATGacaagc GCAUUGUG m6b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-616-3p ttaaCAATGACaagc AGUCAUUG m7b Created HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891
hsa-miR-676-3p ttaacaAGGACAagc CUGUCCUA m6b Disrupted HHKTA_26472_NM_000523|974|1013|2.81241616836421|0.72023493018891

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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