SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000512
Gene Symbol: GALNS
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr16:g.88814480C>A COSM32691 Hx005 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6851-5p tctgaCACCTCCaga AGGAGGUG m7b Disrupted HHKTA_40503_NM_000512|1596|1635|1.90378940627731|0.282328586824528
hsa-miR-6755-3p tcTGACAACtccaga UGUUGUCA m7b (m6b->m7b) HHKTA_40503_NM_000512|1596|1635|1.90378940627731|0.282328586824528
hsa-miR-4309 tctgacaACTCCAGa CUGGAGUC m7a Created HHKTA_40503_NM_000512|1596|1635|1.90378940627731|0.282328586824528
hsa-miR-3689d tctgaCACCTCCaga GGGAGGUG m7b Disrupted HHKTA_40503_NM_000512|1596|1635|1.90378940627731|0.282328586824528

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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