SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000461
Gene Symbol: THRB
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.24122922C>A COSM285716 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148b-5p caCAGAACTcttccc AAGUUCUG m7b (m7b->m6b) HHFKP_95889_cluster-16432_9_8
hsa-miR-4699-5p cacagaAATCTTCcc AGAAGAUU m7b Created HHFKP_95889_cluster-16432_9_8
hsa-miR-6077 cacagaaCTCTTCCc GGGAAGAG m7b Disrupted HHFKP_95889_cluster-16432_9_8
hsa-miR-6874-3p caCAGAACTcttccc CAGUUCUG m7b (m7b->m6b) HHFKP_95889_cluster-16432_9_8

Mutation Mutation ID Sample Name Cancer Type
chr3:g.24122916C>T COSM4405599 TCGA-D9-A6EC-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1253 acTCTTCTCcccttt AGAGAAGA m7b (m6b->m7b) HHFKP_95889_cluster-16432_9_8
hsa-miR-3175 actctTCTCCCCttt CGGGGAGA m7b Created HHFKP_95889_cluster-16432_9_8
hsa-miR-4271 actCTTCCCCCcttt GGGGGAAG m8a Disrupted HHFKP_95889_cluster-16432_9_8
hsa-miR-4434 actCTTCTCCccttt AGGAGAAG m7b Created HHFKP_95889_cluster-16432_9_8
hsa-miR-4516 actCTTCTCCCcttt GGGAGAAG m8a Created HHFKP_95889_cluster-16432_9_8
hsa-miR-4725-3p actCTTCCCCccttt UGGGGAAG m7b Disrupted HHFKP_95889_cluster-16432_9_8
hsa-miR-5197-3p aCTCTTCTccccttt AAGAAGAG m7b Created HHFKP_95889_cluster-16432_9_8
hsa-miR-5703 actCTTCTCCccttt AGGAGAAG m7b Created HHFKP_95889_cluster-16432_9_8
hsa-miR-6077 aCTCTTCCCcccttt GGGAAGAG m8a (m8a->m7a) HHFKP_95889_cluster-16432_9_8
hsa-miR-625-5p actcTTCCCCCcttt AGGGGGAA m7b Disrupted HHFKP_95889_cluster-16432_9_8
hsa-miR-6780b-5p actCTTCCCCccttt UGGGGAAG m7b Disrupted HHFKP_95889_cluster-16432_9_8
hsa-miR-6795-5p actctTCCCCCCttt UGGGGGGA m7b Disrupted HHFKP_95889_cluster-16432_9_8
hsa-miR-6878-5p actcTTCTCCCcttt AGGGAGAA m7b Created HHFKP_95889_cluster-16432_9_8
hsa-miR-6887-5p actctTCCCCCCttt UGGGGGGA m7b Disrupted HHFKP_95889_cluster-16432_9_8

Mutation Mutation ID Sample Name Cancer Type
chr3:g.24122912C>T COSM1267770 ESO-721 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4716-3p tTCCCCCTTttgttc AAGGGGGA m8a (m7a->m8a) HHFKP_95889_cluster-16432_9_8
hsa-miR-625-5p TTCCCCCTtttgttc AGGGGGAA m8a Created HHFKP_95889_cluster-16432_9_8
hsa-miR-6794-5p tTCCCCCTtttgttc CAGGGGGA m7b Created HHFKP_95889_cluster-16432_9_8
Mutation Mutation ID Sample Name Cancer Type
chr3:g.24122903T>C COSM4116616 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation Mutation ID Sample Name Cancer Type
chr3:g.24122899A>C COSM4116615 TCGA-HU-A4GH-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr3:g.24122893C>T COSM1043332 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-371a-5p aagtGTTTGAGgatt ACUCAAAC m7b Created HHFKP_95889_cluster-16432_9_8
hsa-miR-372-5p aagtgTTTGAGGatt CCUCAAAU m7a Created HHFKP_95889_cluster-16432_9_8

Mutation Mutation ID Sample Name Cancer Type
chr3:g.24122889G>T COSM1422168 TCGA-AZ-4681-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8084 gttcgAGTATTagac GAAUACUA m6b Created HHFKP_95889_cluster-16432_9_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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