SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000454
Gene Symbol: SOD1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.31668892T>G COSN1890795 RK046_C02 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-369-3p atggcacGTATTATg AAUAAUAC m7b Created HPRO6_50245_G59556.1_33041191
hsa-miR-371a-3p atGGCACTTattatg AAGUGCCG m7a (m7a->m6a) HPRO6_50245_G59556.1_33041191
hsa-miR-371b-3p atGGCACTTattatg AAGUGCCC m7a (m7a->m6a) HPRO6_50245_G59556.1_33041191
hsa-miR-372-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-373-3p atgGCACTTattatg GAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-519a-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-519b-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-519c-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-519e-3p atGGCACTTattatg AAGUGCCU m7a (m7a->m6a) HPRO6_50245_G59556.1_33041191
hsa-miR-520a-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-520b atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-520c-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-520d-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-520e atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-6082 atggcACGTATTatg GAAUACGU m7b Created HPRO6_50245_G59556.1_33041191
hsa-miR-369-3p atggcacGTATTATg AAUAAUAC m7b Created HPRO6_50245_G59556.1_33041191
hsa-miR-371a-3p atGGCACTTattatg AAGUGCCG m7a (m7a->m6a) HPRO6_50245_G59556.1_33041191
hsa-miR-371b-3p atGGCACTTattatg AAGUGCCC m7a (m7a->m6a) HPRO6_50245_G59556.1_33041191
hsa-miR-372-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-373-3p atgGCACTTattatg GAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-519a-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-519b-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-519c-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-519e-3p atGGCACTTattatg AAGUGCCU m7a (m7a->m6a) HPRO6_50245_G59556.1_33041191
hsa-miR-520a-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-520b atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-520c-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-520d-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-520e atgGCACTTattatg AAAGUGCU m6b Disrupted HPRO6_50245_G59556.1_33041191
hsa-miR-6082 atggcACGTATTatg GAAUACGU m7b Created HPRO6_50245_G59556.1_33041191

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667357C>T COSM1307728 TCGA-DK-A3IT-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1322 attGCATCATtggcc GAUGAUGC m7b Disrupted HPRO6_50243_G59553.1_33039668

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667274G>T COSM1190330 LC_C6 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125b-2-3p agACTTGTGcaatgt UCACAAGU m7b (m6b->m7b) HPRO6_50242_G59552.1_33039593
hsa-miR-25-3p agacttGTGCAATGt CAUUGCAC m8a Created HPRO6_50242_G59552.1_33039593
hsa-miR-32-5p agacttGTGCAATgt UAUUGCAC m7b Created HPRO6_50242_G59552.1_33039593
hsa-miR-363-3p agacttGTGCAATgt AAUUGCAC m7b Created HPRO6_50242_G59552.1_33039593
hsa-miR-367-3p agacttGTGCAATgt AAUUGCAC m7b Created HPRO6_50242_G59552.1_33039593
hsa-miR-3691-3p aGACTTGGgcaatgt ACCAAGUC m7b Disrupted HPRO6_50242_G59552.1_33039593
hsa-miR-4317 agacttgGGCAATGt ACAUUGCC m7b Disrupted HPRO6_50242_G59552.1_33039593
hsa-miR-6882-5p aGACTTGTgcaatgt UACAAGUC m7b Created HPRO6_50242_G59552.1_33039593
hsa-miR-92a-3p agacttGTGCAATgt UAUUGCAC m7b Created HPRO6_50242_G59552.1_33039593
hsa-miR-92b-3p agacttGTGCAATgt UAUUGCAC m7b Created HPRO6_50242_G59552.1_33039593

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667273G>A COSM1030066 TCGA-DI-A0WH-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3691-3p gaGACTTGGgcaatg ACCAAGUC m7b (m7b->m6b) HPRO6_50242_G59552.1_33039593
hsa-miR-4774-3p gagactTAGGCAATg AUUGCCUA m8a Created HPRO6_50242_G59552.1_33039593

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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