SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000454
Gene Symbol: SOD1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.31668892T>G COSN1890796 RK046_C02 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-373-3p atgGCACTTattatg GAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-372-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-371b-3p atGGCACTTattatg AAGUGCCC m7a (m7a->m6a) HPHES_5052_G6711.1_33041200
hsa-miR-371a-3p atGGCACTTattatg AAGUGCCG m7a (m7a->m6a) HPHES_5052_G6711.1_33041200
hsa-miR-369-3p atggcacGTATTATg AAUAAUAC m7b Created HPHES_5052_G6711.1_33041200
hsa-miR-520d-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-6082 atggcACGTATTatg GAAUACGU m7b Created HPHES_5052_G6711.1_33041200
hsa-miR-520e atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-520c-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-520b atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-520a-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-519e-3p atGGCACTTattatg AAGUGCCU m7a (m7a->m6a) HPHES_5052_G6711.1_33041200
hsa-miR-519c-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-519b-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-519a-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-373-3p atgGCACTTattatg GAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-372-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-371b-3p atGGCACTTattatg AAGUGCCC m7a (m7a->m6a) HPHES_5052_G6711.1_33041200
hsa-miR-371a-3p atGGCACTTattatg AAGUGCCG m7a (m7a->m6a) HPHES_5052_G6711.1_33041200
hsa-miR-369-3p atggcacGTATTATg AAUAAUAC m7b Created HPHES_5052_G6711.1_33041200
hsa-miR-520d-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-6082 atggcACGTATTatg GAAUACGU m7b Created HPHES_5052_G6711.1_33041200
hsa-miR-520e atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-520c-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-520b atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-520a-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-519e-3p atGGCACTTattatg AAGUGCCU m7a (m7a->m6a) HPHES_5052_G6711.1_33041200
hsa-miR-519c-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-519b-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPHES_5052_G6711.1_33041200
hsa-miR-519a-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HPHES_5052_G6711.1_33041200

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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