SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000454
Gene Symbol: SOD1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.31668892T>G COSN1890795 RK046_C02 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-369-3p atggcacGTATTATg AAUAAUAC m7b Created HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-371a-3p atGGCACTTattatg AAGUGCCG m7a (m7a->m6a) HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-371b-3p atGGCACTTattatg AAGUGCCC m7a (m7a->m6a) HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-372-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-373-3p atgGCACTTattatg GAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-519a-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-519b-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-519c-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-519e-3p atGGCACTTattatg AAGUGCCU m7a (m7a->m6a) HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520a-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520b atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520c-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520d-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520e atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-6082 atggcACGTATTatg GAAUACGU m7b Created HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-369-3p atggcacGTATTATg AAUAAUAC m7b Created HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-371a-3p atGGCACTTattatg AAGUGCCG m7a (m7a->m6a) HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-371b-3p atGGCACTTattatg AAGUGCCC m7a (m7a->m6a) HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-372-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-373-3p atgGCACTTattatg GAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-519a-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-519b-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-519c-3p atgGCACTTattatg AAAGUGCA m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-519e-3p atGGCACTTattatg AAGUGCCU m7a (m7a->m6a) HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520a-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520b atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520c-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520d-3p atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-520e atgGCACTTattatg AAAGUGCU m6b Disrupted HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255
hsa-miR-6082 atggcACGTATTatg GAAUACGU m7b Created HHKTA_10351_NM_000454|894|933|6.40365527566005|29.2791781456255

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31668826A>G COSN5865627
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-3p atcacAGGTGGGtat CCCCACCU m7b Created HHKTA_29441_NM_000454|837|876|2.50954058100191|29.2791781456255
hsa-miR-4679 ATCACAGAtgggtat UCUGUGAU m8a Disrupted HHKTA_29441_NM_000454|837|876|2.50954058100191|29.2791781456255
hsa-miR-5591-3p atcacagATGGGTAt AUACCCAU m7b Disrupted HHKTA_29441_NM_000454|837|876|2.50954058100191|29.2791781456255

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667357C>T COSM1307728 TCGA-DK-A3IT-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1322 attGCATCATtggcc GAUGAUGC m7b Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667349C>T COSM4382236 262LT [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p aggagacCATTGCAt CUGCAAUG m7b Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-4474-5p agGAGACTAttgcat UUAGUCUC m7b (m6b->m7b) HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-6843-3p agGAGACCATtgcat AUGGUCUC m8a Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-6848-3p agGAGACCAttgcat GUGGUCUC m7b (m7b->m6b) HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667349C>A COSM1030068 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p aggagacCATTGCAt CUGCAAUG m7b Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-6843-3p agGAGACCATtgcat AUGGUCUC m8a Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-6848-3p agGAGACCAttgcat GUGGUCUC m7b (m7b->m6b) HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667341C>G COSM3799849 TCGA-DK-A3X1-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1200 tcactCTCAGGAGac CUCCUGAG m8a Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-1976 tcactctCAGGAGac CCUCCUGC m6b Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-3653-5p tcactcTCAGGAGac CCUCCUGA m7b Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-378a-5p tcactcTCAGGAGac CUCCUGAC m7a Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-4251 tcacTCTCAGGagac CCUGAGAA m7a Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-4279 tcactctGAGGAGAc CUCUCCUC m7b Created HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-4324 tcacTCTCAGGagac CCCUGAGA m7b Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-4329 tcacTCTCAGGagac CCUGAGAC m7a Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-4330 tcacTCTGAGGagac CCUCAGAU m7a Created HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-4693-3p tCACTCTCAggagac UGAGAGUG m8a (m8a->m7a) HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-544b tcactCTCAGGagac ACCUGAGG m6b Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-5586-3p TCACTCTGaggagac CAGAGUGA m8a Created HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-6761-5p tcaCTCTCAGgagac UCUGAGAG m7b Disrupted HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-759 tCACTCTGaggagac GCAGAGUG m7b Created HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667333C>G COSM444362 TCGA-A2-A04W-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-5p ctgtgatGTCACTCt UGAGUGAC m7b Created HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-3913-3p ctgTGATGTCactct AGACAUCA m7b Created HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-489-3p ctgtGATGTCACtct GUGACAUC m8a Created HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-499a-3p ctGTGATGTcactct AACAUCAC m7b (m6b->m7b) HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255
hsa-miR-499b-3p ctGTGATGTcactct AACAUCAC m7b (m6b->m7b) HHKTA_50390_NM_000454|452|491|1.34130617260447|29.2791781456255

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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