SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000454
Gene Symbol: SOD1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.31668584C>A COSN8407880 B52-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-3p aaACATTCCcttgga UGGAAUGU m7b (m7b->m6b) HHHNA_15146_SOD1|NM_000454|exon_utr3|-5.64901670729614|0.775005916795474
hsa-miR-206 aaACATTCCcttgga UGGAAUGU m7b (m7b->m6b) HHHNA_15146_SOD1|NM_000454|exon_utr3|-5.64901670729614|0.775005916795474
hsa-miR-548ag aaacaTTACCTTgga AAAGGUAA m7b Created HHHNA_15146_SOD1|NM_000454|exon_utr3|-5.64901670729614|0.775005916795474
hsa-miR-548ai aaacaTTACCTTgga AAAGGUAA m7b Created HHHNA_15146_SOD1|NM_000454|exon_utr3|-5.64901670729614|0.775005916795474
hsa-miR-548ba aaacaTTACCTTgga AAAGGUAA m7b Created HHHNA_15146_SOD1|NM_000454|exon_utr3|-5.64901670729614|0.775005916795474
hsa-miR-570-5p aaacaTTACCTTgga AAAGGUAA m7b Created HHHNA_15146_SOD1|NM_000454|exon_utr3|-5.64901670729614|0.775005916795474
hsa-miR-613 aaACATTCCcttgga AGGAAUGU m7b (m7b->m6b) HHHNA_15146_SOD1|NM_000454|exon_utr3|-5.64901670729614|0.775005916795474
hsa-miR-6716-5p aaaCATTCCCttgga UGGGAAUG m7b Disrupted HHHNA_15146_SOD1|NM_000454|exon_utr3|-5.64901670729614|0.775005916795474

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31668559T>C COSM1030069 TCGA-AP-A051-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-3p tgtgGTGCAATtggg CAUUGCAC m7b Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-32-5p tgtgGTGCAATtggg UAUUGCAC m7b Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-363-3p tgtgGTGCAATTggg AAUUGCAC m8a Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-367-3p tgtgGTGCAATTggg AAUUGCAC m8a Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-4275 tgtggtGTAATTGGg CCAAUUAC m8a Disrupted HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-500a-3p tgtGGTGCAattggg AUGCACCU m6b Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-767-5p tgTGGTGCAattggg UGCACCAU m7a (m6a->m7a) HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-92a-3p tgtgGTGCAATtggg UAUUGCAC m7b Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-92b-3p tgtgGTGCAATtggg UAUUGCAC m7b Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31668556G>A COSM4728904 T3033 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-499a-3p gcttGTGATGTaatt AACAUCAC m7b Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-499b-3p gcttGTGATGTaatt AACAUCAC m7b Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-513b-5p gCTTGTGAtgtaatt UUCACAAG m7b Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31668538G>C COSM1615985 HX10T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4738-5p aaCGCTGGaagtcgt ACCAGCGC m6b Disrupted HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-617 aacgctGGAAGTCgt AGACUUCC m7b Disrupted HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052
hsa-miR-7156-3p aacGCTGCAagtcgt CUGCAGCC m6b Created HHHNA_15145_SOD1|NM_000454|exon_CDS|-6.77902242453923|2.80575436307052

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667288T>C COSM4789002 CHC1598T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-214-3p tgaCTGCTGacaaag ACAGCAGG m6b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4274 tGACTGCTGacaaag CAGCAGUC m8a (m8a->m7a) HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4291 tgaCTGCTGAcaaag UUCAGCAG m7b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4519 tgACTGCTGacaaag CAGCAGUG m7a (m7a->m6a) HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-761 tgaCTGCTGacaaag GCAGCAGG m6b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-922 tgaCTGCTGacaaag GCAGCAGA m6b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667286G>A COSM1030067 TCGA-BG-A0MG-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-199a-3p tgtgACTACTGacaa ACAGUAGU m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-199b-3p tgtgACTACTGacaa ACAGUAGU m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-214-3p tgtgaCTGCTGacaa ACAGCAGG m6b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-222-5p tgtgaCTACTGAcaa CUCAGUAG m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-223-3p tgtgactACTGACAa UGUCAGUU m7a Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-3129-5p tgtgACTACTGacaa GCAGUAGU m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4274 tgtGACTGCTGacaa CAGCAGUC m8a Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4291 tgtgaCTGCTGAcaa UUCAGCAG m7b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4519 tgtgACTGCTGacaa CAGCAGUG m7a Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4697-3p tgtgactACTGACAa UGUCAGUG m7a Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4704-3p tGTGACTGctgacaa UCAGUCAC m7b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-761 tgtgaCTGCTGacaa GCAGCAGG m6b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-922 tgtgaCTGCTGacaa GCAGCAGA m6b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-936 tgtgaCTACTGacaa ACAGUAGA m6b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667274G>T COSM1190330 LC_C6 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125b-2-3p agACTTGTGcaatgt UCACAAGU m7b (m6b->m7b) HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-25-3p agacttGTGCAATGt CAUUGCAC m8a Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-32-5p agacttGTGCAATgt UAUUGCAC m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-363-3p agacttGTGCAATgt AAUUGCAC m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-367-3p agacttGTGCAATgt AAUUGCAC m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-3691-3p aGACTTGGgcaatgt ACCAAGUC m7b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4317 agacttgGGCAATGt ACAUUGCC m7b Disrupted HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-6882-5p aGACTTGTgcaatgt UACAAGUC m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-92a-3p agacttGTGCAATgt UAUUGCAC m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-92b-3p agacttGTGCAATgt UAUUGCAC m7b Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517

Mutation Mutation ID Sample Name Cancer Type
chr21:g.31667273G>A COSM1030066 TCGA-DI-A0WH-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3691-3p gaGACTTGGgcaatg ACCAAGUC m7b (m7b->m6b) HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517
hsa-miR-4774-3p gagactTAGGCAATg AUUGCCUA m8a Created HHHNA_15143_SOD1|NM_000454|exon_CDS|-6.63948605803743|1.77032311015517

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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