SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000446
Gene Symbol: PON1
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.95315350T>G COSM3883542 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125b-1-3p tTAACCCGcatggga ACGGGUUA m7b Created HHFKP_131686_cluster-21516_1_41
hsa-miR-296-3p ttAACCCTCatggga GAGGGUUG m7a (m7a->m6a) HHFKP_131686_cluster-21516_1_41
hsa-miR-3621 ttaACCCGCatggga CGCGGGUC m6b Created HHFKP_131686_cluster-21516_1_41
hsa-miR-3656 ttaACCCGCatggga GGCGGGUG m6b Created HHFKP_131686_cluster-21516_1_41
hsa-miR-6872-3p ttaacccGCATGGGa CCCAUGCC m7a Created HHFKP_131686_cluster-21516_1_41

Mutation Mutation ID Sample Name Cancer Type
chr7:g.95315345G>T COSM284149 TCGA-AA-A010-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34b-3p cctcatGTGATTagc CAAUCACU m6b Created HHFKP_131686_cluster-21516_1_41
hsa-miR-4717-3p cctCATGTGattagc ACACAUGG m6b Created HHFKP_131686_cluster-21516_1_41
hsa-miR-4733-5p cctcaTGGGATTagc AAUCCCAA m7a Disrupted HHFKP_131686_cluster-21516_1_41

Mutation Mutation ID Sample Name Cancer Type
chr7:g.95315325G>A COSM3924287 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p cacagATGAAGGtaa UCCUUCAU m7b Disrupted HHFKP_131686_cluster-21516_1_41
hsa-miR-452-3p caCAGATGAaggtaa CUCAUCUG m7b (m7b->m6b) HHFKP_131686_cluster-21516_1_41
hsa-miR-4724-3p cacagatGAAGGTAa GUACCUUC m7b Disrupted HHFKP_131686_cluster-21516_1_41
hsa-miR-6782-3p cacagatAAAGGTaa CACCUUUG m6b Created HHFKP_131686_cluster-21516_1_41

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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