SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000440 |
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Gene Symbol: | PDE6A |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr5:g.149932346A>G | COSN158416 | TCGA-13-0920-01 | [ovary][NS][carcinoma][serous_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4263 | gatTTAGAAagacct | AUUCUAAG | m6b | Disrupted | HHFCT_125685_uc003lrg.2_3_21 |
hsa-miR-5009-3p | gATTTAGGAagacct | UCCUAAAU | m8a | (m7a->m8a) | HHFCT_125685_uc003lrg.2_3_21 |
hsa-miR-6830-3p | gatttaGAAAGACct | UGUCUUUC | m7b | Disrupted | HHFCT_125685_uc003lrg.2_3_21 |
hsa-miR-576-5p | gatTTAGAAagacct | AUUCUAAU | m6b | Disrupted | HHFCT_125685_uc003lrg.2_3_21 |
hsa-miR-4799-5p | gATTTAGAaagacct | AUCUAAAU | m7b | Disrupted | HHFCT_125685_uc003lrg.2_3_21 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr5:g.149932309T>A | COSN15131264 | PD4199a | [NS][NS][NS][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-423-3p | aaatCCGAGCagttg | AGCUCGGU | m6b | Created | HHFCT_125685_uc003lrg.2_3_21 |
hsa-miR-3917 | aaaTCCGAGCagttg | GCUCGGAC | m7a | Created | HHFCT_125685_uc003lrg.2_3_21 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr5:g.149932299C>A | COSN15131406 | PD4199a | [NS][NS][NS][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4474-5p | agttggcAGACTAAa | UUAGUCUC | m7a | Created | HHFCT_125685_uc003lrg.2_3_21 |
hsa-miR-346 | agttGGCAGACtaaa | UGUCUGCC | m7b | Created | HHFCT_125685_uc003lrg.2_3_21 |
hsa-miR-192-3p | agTTGGCAGactaaa | CUGCCAAU | m7a | (m6a->m7a) | HHFCT_125685_uc003lrg.2_3_21 |
hsa-miR-4727-5p | agtTGGCAGActaaa | AUCUGCCA | m7b | Created | HHFCT_125685_uc003lrg.2_3_21 |