SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000436
Gene Symbol: OXCT1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.41739484T>C COSM1237154 6 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 gctgTGTCTGatgtg CCAGACAG m6b Created HHFKP_113272_uc003jmn.1_18_336

Mutation Mutation ID Sample Name Cancer Type
chr5:g.41739453G>C COSM1543953 TCGA-78-7148-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34a-3p tgactCTGATTGagc CAAUCAGC m7a Disrupted HHFKP_113272_uc003jmn.1_18_336
hsa-miR-4712-3p tgaCTCTCATTgagc AAUGAGAG m8a Created HHFKP_113272_uc003jmn.1_18_336
hsa-miR-759 tgACTCTGattgagc GCAGAGUG m6b Disrupted HHFKP_113272_uc003jmn.1_18_336

Mutation Mutation ID Sample Name Cancer Type
chr5:g.41731756C>G COSM3357894 tumor_4191799 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4328 cAAAACTGatgccaa CCAGUUUU m7b Created HHFKP_113270_uc003jmn.1_16_49
hsa-miR-4642 caaaactGATGCCAa AUGGCAUC m7b Created HHFKP_113270_uc003jmn.1_16_49
hsa-miR-4711-5p caaaaCTGATGCcaa UGCAUCAG m7b Created HHFKP_113270_uc003jmn.1_16_49
hsa-miR-3622b-5p caaaactCATGCCaa AGGCAUGG m6b Disrupted HHFKP_113270_uc003jmn.1_16_49

Mutation Mutation ID Sample Name Cancer Type
chr5:g.41731741G>C COSM449683 TCGA-BH-A0HP-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3692-5p tgCAGCAGatcgcaa CCUGCUGG m6b Disrupted HHFKP_113270_uc003jmn.1_16_49
hsa-miR-4686 tgcAGCAGATcgcaa UAUCUGCU m7b Disrupted HHFKP_113270_uc003jmn.1_16_49
hsa-miR-93-3p tgCAGCAGatcgcaa ACUGCUGA m6b Disrupted HHFKP_113270_uc003jmn.1_16_49
hsa-miR-6071 tgCAGCAGAtcgcaa UUCUGCUG m7b (m7b->m6b) HHFKP_113270_uc003jmn.1_16_49

Mutation Mutation ID Sample Name Cancer Type
chr5:g.41731571G>C COSN6297485 RK213_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6069 tctCTAGCCatgctg GGGCUAGG m6b Created HHFKP_113268_uc003jmn.1_13_36

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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