SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000434
Gene Symbol: NEU1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.31860174G>A COSM4988663 RMS80_ [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4528 cagcTATAATGcctg UCAUUAUA m7b Created HHRBL_12284_BCBL1-2of3-SCL_7186

Mutation Mutation ID Sample Name Cancer Type
chr6:g.31860158T>C COSM4572907 CSCC-60-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3591-5p gatACACTAAggccc UUUAGUGU m7b Disrupted HHRBL_12284_BCBL1-2of3-SCL_7186
hsa-miR-4280 gaTACACTaaggccc GAGUGUAG m6b Disrupted HHRBL_12284_BCBL1-2of3-SCL_7186

Mutation Mutation ID Sample Name Cancer Type
chr6:g.31860136C>T COSM3830132 TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1178-5p tgaccttTGACCCTg CAGGGUCA m7b Created HHRBL_12284_BCBL1-2of3-SCL_7186
hsa-miR-548m tgACCTTTGaccctg CAAAGGUA m7a (m6a->m7a) HHRBL_12284_BCBL1-2of3-SCL_7186

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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