SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000416
Gene Symbol: IFNGR1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.137203686G>C COSM1545276 TCGA-80-5607-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3668 tcaTCTACATccagt AAUGUAGA m7b Created HPRO6_69180_G82526.1_137524810
hsa-miR-4777-5p tcATCTAGAtccagt UUCUAGAU m7b (m7b->m6b) HPRO6_69180_G82526.1_137524810

Mutation Mutation ID Sample Name Cancer Type
chr6:g.137203681A>G COSM739932 TCGA-22-4613-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1243 tagATCCAGTataaa AACUGGAU m7b Disrupted HPRO6_69180_G82526.1_137524810
hsa-miR-3144-3p tagatccGGTATAaa AUAUACCU m6b Created HPRO6_69180_G82526.1_137524810
hsa-miR-3654 tagaTCCAGTataaa GACUGGAC m6b Disrupted HPRO6_69180_G82526.1_137524810
hsa-miR-378j tagATCCAGTataaa ACUGGAUU m7a Disrupted HPRO6_69180_G82526.1_137524810

Mutation Mutation ID Sample Name Cancer Type
chr6:g.137200968T>A COSM1180438 SWE-55B [prostate][NS][adenoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3923 tactctTACTAGTgc AACUAGUA m7b Created HPRO6_69178_G82524.1_137522113
hsa-miR-628-3p tactcTTACTAGtgc UCUAGUAA m7b Created HPRO6_69178_G82524.1_137522113
hsa-miR-6508-5p tactcTTTCTAGtgc UCUAGAAA m7b Disrupted HPRO6_69178_G82524.1_137522113
hsa-miR-8067 tactcTTTCTAGtgc CCUAGAAA m7b Disrupted HPRO6_69178_G82524.1_137522113

Mutation Mutation ID Sample Name Cancer Type
chr6:g.137198210C>T COSM739934 TCGA-18-3409-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1275 agaattTCCCCCAaa GUGGGGGA m7b Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-2110 agaattTTCCCCAAa UUGGGGAA m8a Created HPRO6_69177_G82522.1_137519335
hsa-miR-3150a-3p agaatttTCCCCAaa CUGGGGAG m6b Created HPRO6_69177_G82522.1_137519335
hsa-miR-4271 agaatTTCCCCCaaa GGGGGAAG m7a Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-450a-2-3p agaatttTCCCCAAa AUUGGGGA m7b Created HPRO6_69177_G82522.1_137519335
hsa-miR-4525 agaattTCCCCCaaa GGGGGGAU m6b Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-4665-5p agaattTCCCCCAaa CUGGGGGA m7b Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-4668-5p agaaTTTTCCCcaaa AGGGAAAA m7b Created HPRO6_69177_G82522.1_137519335
hsa-miR-4723-5p agaattTCCCCCAaa UGGGGGAG m7a Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-4725-3p agaattTTCCCCAaa UGGGGAAG m7a Created HPRO6_69177_G82522.1_137519335
hsa-miR-5010-5p agaattTCCCCCaaa AGGGGGAU m6b Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-5698 agaattTCCCCCAaa UGGGGGAG m7a Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-625-5p agaatTTCCCCCaaa AGGGGGAA m7b Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-6751-5p agaatttCCCCCAAa UUGGGGGU m7a Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-6763-5p agaatttTCCCCAaa CUGGGGAG m6b Created HPRO6_69177_G82522.1_137519335
hsa-miR-6780b-5p agaattTTCCCCAaa UGGGGAAG m7a Created HPRO6_69177_G82522.1_137519335
hsa-miR-6803-5p agaatttCCCCCAaa CUGGGGGU m6b Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-6810-5p agaatttTCCCCAaa AUGGGGAC m6b Created HPRO6_69177_G82522.1_137519335
hsa-miR-6857-5p agaatttTCCCCAAa UUGGGGAU m7a Created HPRO6_69177_G82522.1_137519335
hsa-miR-6870-5p agaattTCCCCCAaa UGGGGGAG m7a Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-7109-5p agaatttCCCCCAaa CUGGGGGG m6b Disrupted HPRO6_69177_G82522.1_137519335
hsa-miR-7111-5p agaattTCCCCCAaa UGGGGGAG m7a Disrupted HPRO6_69177_G82522.1_137519335

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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