SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000414
Gene Symbol: HSD17B4
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.119536507A>C COSM1060007 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20a-3p tcagATGCAGatttc ACUGCAUU m6b Created HPRO6_60748_G72752.1_118872197
hsa-miR-452-3p tCAGATGAagatttc CUCAUCUG m7b Disrupted HPRO6_60748_G72752.1_118872197

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119536489C>T COSM4415090 SNUH_G73_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3613-5p gaTACAACAatcata UGUUGUAC m7a (m7a->m6a) HPRO6_60748_G72752.1_118872197
hsa-miR-4445-5p gatacAACAATCata AGAUUGUU m7b Disrupted HPRO6_60748_G72752.1_118872197

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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