SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000414
Gene Symbol: HSD17B4
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.119536507A>C COSM1060007 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20a-3p tcagATGCAGatttc ACUGCAUU m6b Created HHKTA_15525_NM_000414|2164|2203|4.62966969253801|1.50652796497832
hsa-miR-452-3p tCAGATGAagatttc CUCAUCUG m7b Disrupted HHKTA_15525_NM_000414|2164|2203|4.62966969253801|1.50652796497832

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119536489C>T COSM4415090 SNUH_G73_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3613-5p gaTACAACAatcata UGUUGUAC m7a (m7a->m6a) HHKTA_15525_NM_000414|2164|2203|4.62966969253801|1.50652796497832
hsa-miR-4445-5p gatacAACAATCata AGAUUGUU m7b Disrupted HHKTA_15525_NM_000414|2164|2203|4.62966969253801|1.50652796497832

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119527160G>A COSM448487 TCGA-BH-A0AV-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-3p atatccAGGACAAac AUUGUCCU m7b Disrupted HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-3690 ataTCCAGGacaaac ACCUGGAC m6b Disrupted HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-4254 ataTCCAGGacaaac GCCUGGAG m6b Disrupted HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-431-5p atatcCAAGACAaac UGUCUUGC m7a Created HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-4646-3p atatccaGGACAAac AUUGUCCC m6b Disrupted HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-5004-3p atATCCAAGacaaac CUUGGAUU m7a (m6a->m7a) HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-511-5p atatccAAGACAaac GUGUCUUU m6b Created HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-676-3p atatccAGGACAaac CUGUCCUA m6b Disrupted HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119527147A>C COSM4691271 T3155 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-19a-5p ttGCAAAACcagtat AGUUUUGC m7b (m7b->m6b) HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-19b-1-5p ttGCAAAACcagtat AGUUUUGC m7b (m7b->m6b) HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-19b-2-5p ttGCAAAACcagtat AGUUUUGC m7b (m7b->m6b) HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-29b-1-5p ttgcaAAACCAGtat GCUGGUUU m7b Disrupted HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-450b-5p TTGCAAAAccagtat UUUUGCAA m8a Disrupted HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-5087 ttgCAAACCCagtat GGGUUUGU m7a Created HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-6839-3p ttgcAAACCCAgtat UUGGGUUU m7b Created HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832
hsa-miR-6861-5p ttgcaaACCCAGTat ACUGGGUA m7a Created HHKTA_29789_NM_000414|1805|1844|2.50954058100191|1.50652796497832

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119499422G>T COSM1060000 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3671 tccaaaaTATTTGAa AUCAAAUA m7b Created HHKTA_48083_NM_000414|1183|1222|1.47110999575974|1.50652796497832
hsa-miR-4762-5p tccaaaAGATTTGaa CCAAAUCU m7b Disrupted HHKTA_48083_NM_000414|1183|1222|1.47110999575974|1.50652796497832

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119499416C>G COSM448485 TCGA-BH-A0AW-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-324-5p caaGGATGCaaaaga CGCAUCCC m6b Created HHKTA_48083_NM_000414|1183|1222|1.47110999575974|1.50652796497832
hsa-miR-3680-3p caaggATGCAAAAga UUUUGCAU m8a Created HHKTA_48083_NM_000414|1183|1222|1.47110999575974|1.50652796497832
hsa-miR-5004-3p caaggATCCAAaaga CUUGGAUU m6b Disrupted HHKTA_48083_NM_000414|1183|1222|1.47110999575974|1.50652796497832
hsa-miR-557 caaggaTGCAAAaga GUUUGCAC m6b Created HHKTA_48083_NM_000414|1183|1222|1.47110999575974|1.50652796497832
hsa-miR-7850-5p caaggaTCCAAAaga GUUUGGAC m6b Disrupted HHKTA_48083_NM_000414|1183|1222|1.47110999575974|1.50652796497832

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119496625G>A COSM4975168 1N38-VS-1T38 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-376a-2-5p gtgcaacATCTACag GGUAGAUU m6b Created HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-576-3p gtgcaACATCTacag AAGAUGUG m6b Created HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119496590G>T COSM311864 S00472 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-3p ttCAGAAGGAggagt UCCUUCUG m8a Disrupted HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-1248 ttcAGAAGGaggagt ACCUUCUU m6b Disrupted HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-660-3p ttcagaAGGAGGagt ACCUCCUG m6b Disrupted HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-6758-3p ttcaGAATGAGgagt ACUCAUUC m7b Created HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-6868-3p ttcAGAAGGAggagt UUCCUUCU m7b Disrupted HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-6891-3p ttcagaATGAGGagt CCCUCAUC m6b Created HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832

Mutation Mutation ID Sample Name Cancer Type
chr5:g.119496585C>T COSM4841303 TCGA-FU-A770-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-3p atagattCAGAAGGa UCCUUCUG m7b Disrupted HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-4427 atagATTCAGAagga UCUGAAUA m7a Disrupted HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-4680-3p atagATTCAGAagga UCUGAAUU m7a Disrupted HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-4799-5p atagATTTAGAagga AUCUAAAU m7b Created HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832
hsa-miR-5187-3p ataGATTCAGaagga ACUGAAUC m7b Disrupted HHKTA_51163_NM_000414|1035|1074|1.34130617260447|1.50652796497832

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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