SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000341
Gene Symbol: SLC3A1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.44320537C>T COSM3185318 TCGA-EE-A2MD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p gATTCTTTGtgttgt CAAAGAAU m8a (m7a->m8a) HHKTA_32918_NM_006036|3032|3071|2.24993293469137|0.596596984016948

Mutation Mutation ID Sample Name Cancer Type
chr2:g.44320534G>T COSM359428 LUAD-CHTN-MAD06-00668 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5003-5p tcttcgTGTTGTGtt UCACAACA m7b Disrupted HHKTA_32918_NM_006036|3032|3071|2.24993293469137|0.596596984016948
hsa-miR-548ad-3p tctTCGTTTTgtgtt GAAAACGA m7b Created HHKTA_32918_NM_006036|3032|3071|2.24993293469137|0.596596984016948

Mutation Mutation ID Sample Name Cancer Type
chr2:g.44320509C>T COSM138298 cSCCP4 [skin][face][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6731-5p tccCTCTCCCttgtc UGGGAGAG m7b Disrupted HHKTA_32918_NM_006036|3032|3071|2.24993293469137|0.596596984016948
hsa-miR-6830-5p tccctcTTCCTTGtc CCAAGGAA m7b Created HHKTA_32918_NM_006036|3032|3071|2.24993293469137|0.596596984016948
hsa-miR-6760-5p tcccTCTCCCTtgtc CAGGGAGA m7b Disrupted HHKTA_32918_NM_006036|3032|3071|2.24993293469137|0.596596984016948
hsa-miR-8085 tccCTCTCCCttgtc UGGGAGAG m7b Disrupted HHKTA_32918_NM_006036|3032|3071|2.24993293469137|0.596596984016948
hsa-miR-6077 tccCTCTTCCttgtc GGGAAGAG m7b Created HHKTA_32918_NM_006036|3032|3071|2.24993293469137|0.596596984016948

Mutation Mutation ID Sample Name Cancer Type
chr2:g.44275794G>A COSM3581785 TCGA-EE-A2MR-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p acctcGGAAGATcct CAUCUUCC m7b Created HHKTA_48137_NM_000341|331|370|1.44947602523386|0.228857475952635
hsa-miR-4740-3p acCTCGGGagatcct GCCCGAGA m6b Disrupted HHKTA_48137_NM_000341|331|370|1.44947602523386|0.228857475952635

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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