SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000336
Gene Symbol: SCNN1B
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.23375842G>A COSM3679231 SNUH_G16_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3167 ctggGAAATCCcggt AGGAUUUC m7b Created HPRT3_10290_G13576.1_23387154
hsa-miR-365a-5p ctgggAAGTCCCggt AGGGACUU m7b Disrupted HPRT3_10290_G13576.1_23387154
hsa-miR-365b-5p ctgggAAGTCCCggt AGGGACUU m7b Disrupted HPRT3_10290_G13576.1_23387154
hsa-miR-617 ctgGGAAGTCccggt AGACUUCC m7b Disrupted HPRT3_10290_G13576.1_23387154
hsa-miR-876-5p ctggGAAATCCcggt UGGAUUUC m7b Created HPRT3_10290_G13576.1_23387154
hsa-miR-3167 ctggGAAATCCcggt AGGAUUUC m7b Created HPRT3_10290_G13576.1_23387154
hsa-miR-365a-5p ctgggAAGTCCCggt AGGGACUU m7b Disrupted HPRT3_10290_G13576.1_23387154
hsa-miR-365b-5p ctgggAAGTCCCggt AGGGACUU m7b Disrupted HPRT3_10290_G13576.1_23387154
hsa-miR-617 ctgGGAAGTCccggt AGACUUCC m7b Disrupted HPRT3_10290_G13576.1_23387154
hsa-miR-876-5p ctggGAAATCCcggt UGGAUUUC m7b Created HPRT3_10290_G13576.1_23387154

Mutation Mutation ID Sample Name Cancer Type
chr16:g.23375838C>T COSM3402192 TCGA-81-5910-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8083 gAAGTCCTGgttgtt CAGGACUU m8a (m7a->m8a) HPRT3_10290_G13576.1_23387154
hsa-miR-8083 gAAGTCCTGgttgtt CAGGACUU m8a (m7a->m8a) HPRT3_10290_G13576.1_23387154

Mutation Mutation ID Sample Name Cancer Type
chr16:g.23375837G>T COSM1376785 TCGA-G4-6628-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-211-3p aaGTCCCTGttgttg GCAGGGAC m7b (m6b->m7b) HPRT3_10290_G13576.1_23387154
hsa-miR-365a-5p AAGTCCCTgttgttg AGGGACUU m8a Created HPRT3_10290_G13576.1_23387154
hsa-miR-365b-5p AAGTCCCTgttgttg AGGGACUU m8a Created HPRT3_10290_G13576.1_23387154

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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