SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000328 |
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Gene Symbol: | RPGR |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chrX:g.38285681AG>G | COSM2964237 | C135 | [large_intestine][right][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chrX:g.38285546G>T | COSM3363981 | TCGA-DV-5574-01 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-302a-5p | tggaaTTTAAGTaac | ACUUAAAC | m7a | Created | HHFCT_164736_cluster-24248_29_8 |
hsa-miR-3682-5p | tggaattGAAGTAac | CUACUUCU | m6b | Disrupted | HHFCT_164736_cluster-24248_29_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chrX:g.38285521C>A | COSN510464 | ||||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3610 | tgtgacCCGATTatg | GAAUCGGA | m6b | Disrupted | HHFCT_164735_cluster-24248_28_16 |
hsa-miR-3663-5p | tgtGACCAGattatg | GCUGGUCU | m6b | Created | HHFCT_164735_cluster-24248_28_16 |
hsa-miR-5587-5p | tGTGACCAgattatg | AUGGUCAC | m7b | Created | HHFCT_164735_cluster-24248_28_16 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chrX:g.38283573G>C | COSN9487693 | AOCS-106-1-1 | [ovary][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-7843-5p | aacaCTGCCCTCcct | GAGGGCAG | m8a | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-6883-5p | aacactgCCCTCCCt | AGGGAGGG | m7b | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-6879-5p | aacaCTGCCCTccct | CAGGGCAG | m7b | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-6785-5p | aacactgCCCTCCCt | UGGGAGGG | m7b | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-6735-5p | aacaCTGCCCTccct | CAGGGCAG | m7b | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-4436b-3p | aacaCTGCCCTccct | CAGGGCAG | m7b | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-3616-3p | aacacTGCCCTCcct | CGAGGGCA | m7b | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-34c-5p | aaCACTGCCctccct | AGGCAGUG | m7b | (m6b->m7b) | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-34a-5p | aaCACTGCCctccct | UGGCAGUG | m7b | (m6b->m7b) | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-449a | aaCACTGCCctccct | UGGCAGUG | m7b | (m6b->m7b) | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-199b-5p | aACACTGGcctccct | CCCAGUGU | m7b | Disrupted | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-199a-5p | aACACTGGcctccct | CCCAGUGU | m7b | Disrupted | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-149-3p | aacactgCCCTCCCt | AGGGAGGG | m7b | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-4728-5p | aacactgCCCTCCCt | UGGGAGGG | m7b | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-6499-3p | aACACTGCcctccct | AGCAGUGU | m7b | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-4632-5p | aacaCTGCCCTCcct | GAGGGCAG | m8a | Created | HHFCT_164725_cluster-24248_16_16 |
hsa-miR-449b-5p | aaCACTGCCctccct | AGGCAGUG | m7b | (m6b->m7b) | HHFCT_164725_cluster-24248_16_16 |