SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000321 |
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Gene Symbol: | RB1 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr13:g.48465053A>G | COSM551465 | TCGA-CM-6161-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.48465049T>A | COSM947802 | TCGA-AP-A054-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-8084 | taTAGTATTCtataa | GAAUACUA | m8a | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-8084 | taTAGTATTCtataa | GAAUACUA | m8a | Disrupted | HPCB1_11259_G14045.1_49039178 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.48465047T>G | COSM916 | S83127 | [central_nervous_system][brain][glioma][astrocytoma_Grade_IV] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-337-3p | atTATAGGAttctat | CUCCUAUA | m7b | (m6b->m7b) | HPCB1_11259_G14045.1_49039178 |
hsa-miR-625-3p | atTATAGTattctat | GACUAUAG | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-8084 | attaTAGTATTCtat | GAAUACUA | m8a | Disrupted | HPCB1_11259_G14045.1_49039178 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.48465044T>TT | COSM4433174 | 428 | [oesophagus][lower_third][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-374a-5p | tcTATTATAgtattc | UUAUAAUA | m7b | (m7b->m6b) | HPCB1_11259_G14045.1_49039178 |
hsa-miR-374b-5p | tcTATTATAgtattc | AUAUAAUA | m7b | (m7b->m6b) | HPCB1_11259_G14045.1_49039178 |
hsa-miR-625-3p | tctatTATAGTattc | GACUAUAG | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-8084 | tctattaTAGTATTc | GAAUACUA | m7b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-374a-5p | tcTATTATAgtattc | UUAUAAUA | m7b | (m7b->m6b) | HPCB1_11259_G14045.1_49039178 |
hsa-miR-374b-5p | tcTATTATAgtattc | AUAUAAUA | m7b | (m7b->m6b) | HPCB1_11259_G14045.1_49039178 |
hsa-miR-625-3p | tctatTATAGTattc | GACUAUAG | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-8084 | tctattaTAGTATTc | GAAUACUA | m7b | Disrupted | HPCB1_11259_G14045.1_49039178 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.48465043A>G | COSM4386818 | S01577 | [lung][NS][carcinoid-endocrine_tumour][atypical] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-338-5p | ttcTATTGTagtatt | AACAAUAU | m6b | Created | HPCB1_11259_G14045.1_49039178 |
hsa-miR-369-3p | ttcTATTATagtatt | AAUAAUAC | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-374a-5p | ttcTATTATAgtatt | UUAUAAUA | m7b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-374b-5p | ttcTATTATAgtatt | AUAUAAUA | m7b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-5692b | ttcTATTATagtatt | AAUAAUAU | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-5692c | ttcTATTATagtatt | AAUAAUAU | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-625-3p | ttctatTATAGTatt | GACUAUAG | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-338-5p | ttcTATTGTagtatt | AACAAUAU | m6b | Created | HPCB1_11259_G14045.1_49039178 |
hsa-miR-369-3p | ttcTATTATagtatt | AAUAAUAC | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-374a-5p | ttcTATTATAgtatt | UUAUAAUA | m7b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-374b-5p | ttcTATTATAgtatt | AUAUAAUA | m7b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-5692b | ttcTATTATagtatt | AAUAAUAU | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-5692c | ttcTATTATagtatt | AAUAAUAU | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-625-3p | ttctatTATAGTatt | GACUAUAG | m6b | Disrupted | HPCB1_11259_G14045.1_49039178 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr13:g.48465038C>A | COSM1587094 | TCGA-D1-A103-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1277-5p | tatgatTATATTata | AAAUAUAU | m6b | Created | HPCB1_11259_G14045.1_49039178 |
hsa-miR-15b-3p | tATGATTCtattata | CGAAUCAU | m7b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-410-3p | tatgaTTATATTata | AAUAUAAC | m7a | Created | HPCB1_11259_G14045.1_49039178 |
hsa-miR-5692b | tatgattATATTATa | AAUAAUAU | m7b | Created | HPCB1_11259_G14045.1_49039178 |
hsa-miR-5692c | tatgattATATTATa | AAUAAUAU | m7b | Created | HPCB1_11259_G14045.1_49039178 |
hsa-miR-1277-5p | tatgatTATATTata | AAAUAUAU | m6b | Created | HPCB1_11259_G14045.1_49039178 |
hsa-miR-15b-3p | tATGATTCtattata | CGAAUCAU | m7b | Disrupted | HPCB1_11259_G14045.1_49039178 |
hsa-miR-410-3p | tatgaTTATATTata | AAUAUAAC | m7a | Created | HPCB1_11259_G14045.1_49039178 |
hsa-miR-5692b | tatgattATATTATa | AAUAAUAU | m7b | Created | HPCB1_11259_G14045.1_49039178 |
hsa-miR-5692c | tatgattATATTATa | AAUAAUAU | m7b | Created | HPCB1_11259_G14045.1_49039178 |