SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000318
Gene Symbol: PEX2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.76983637A>G COSM3901676 TCGA-HU-A4H8-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4307 aagcctcAAAACATa AAUGUUUU m7b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-19a-5p aagcctCAAAACata AGUUUUGC m6b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-19b-1-5p aagcctCAAAACata AGUUUUGC m6b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-19b-2-5p aagcctCAAAACata AGUUUUGC m6b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-2052 aagccTCAAAACAta UGUUUUGA m8a Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-2467-5p aAGCCTCAaaacata UGAGGCUC m7a Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-3975 aAGCCTCAaaacata UGAGGCUA m7a Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-6765-5p aaGCCTCAaaacata GUGAGGCG m6b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-8055 aagcCTCAAAacata CUUUGAGC m6b Disrupted HHFKP_139198_cluster-22413_5_44
hsa-miR-1304-5p aaGCCTCAAAacata UUUGAGGC m8a Disrupted HHFKP_139198_cluster-22413_5_44

Mutation Mutation ID Sample Name Cancer Type
chr8:g.76983032A>G COSN2290367 RK157_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3117-5p attttTAGTGTCaag AGACACUA m7b Created HHFKP_139196_cluster-22413_3_119
hsa-miR-4704-5p attttTAGTGTCaag GACACUAG m7a Created HHFKP_139196_cluster-22413_3_119
hsa-miR-489-3p atttttaATGTCAag GUGACAUC m6b Disrupted HHFKP_139196_cluster-22413_3_119
hsa-miR-514a-3p atttttaGTGTCAAg AUUGACAC m7b Created HHFKP_139196_cluster-22413_3_119
hsa-miR-514b-3p atttttaGTGTCAAg AUUGACAC m7b Created HHFKP_139196_cluster-22413_3_119

Mutation Mutation ID Sample Name Cancer Type
chr8:g.76980522T>C COSN9680663 AOCS-166-1-2 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7112-3p tagGTGATGCtcctc UGCAUCAC m7b Disrupted HHFKP_139194_cluster-22413_1_32

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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