SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000313
Gene Symbol: PROS1
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr3:g.93927306G>A COSM4392644 TCGA-EJ-A65D-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-22-5p atgcatcGAAGAACt AGUUCUUC m7b Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145

Mutation Mutation ID Sample Name Cancer Type
chr3:g.93927303G>A COSM1309510 TCGA-DK-A1AE-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-22-5p catcGAAGAACTgtg AGUUCUUC m8a Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-4277 catcgaAGAACTGtg GCAGUUCU m7b Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-4328 catcgaAAAACTGtg CCAGUUUU m7b Created HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-5584-3p catcgAAGAACTgtg UAGUUCUU m7b Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145

Mutation Mutation ID Sample Name Cancer Type
chr3:g.93927291A>G COSM4120544 TCGA-CD-5800-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-137 gtGCAATAAagaaga UUAUUGCU m7a (m7a->m6a) HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-25-3p GTGCAATGaagaaga CAUUGCAC m8a Created HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-4778-3p gtgcaatGAAGAAGa UCUUCUUC m7b Created HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-92a-3p GTGCAATAaagaaga UAUUGCAC m8a Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-92b-3p GTGCAATAaagaaga UAUUGCAC m8a Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145

Mutation Mutation ID Sample Name Cancer Type
chr3:g.93927289A>G COSM4816479 TCGA-IR-A3LK-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4659a-3p gcaataaAGAAGAAg UUUCUUCU m7b Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-4659b-3p gcaataaAGAAGAAg UUUCUUCU m7b Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-4778-3p gcaataAAGAAGAag UCUUCUUC m7a Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-6875-3p gcaataaGGAAGAAg AUUCUUCC m7b Created HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145

Mutation Mutation ID Sample Name Cancer Type
chr3:g.93927271C>A COSM1425765 TCGA-AA-3510-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3671 gggaggTATTTGAaa AUCAAAUA m7b Created HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-548u gggagGTCTTTGaaa CAAAGACU m7a Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-607 gggaggtATTTGAAa GUUCAAAU m7b Created HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145
hsa-miR-875-5p ggGAGGTATttgaaa UAUACCUC m7b (m6b->m7b) HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145

Mutation Mutation ID Sample Name Cancer Type
chr3:g.93927263A>T COSM1471621 TCGA-HC-7740-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p tttGAAAATGacccg ACAUUUUC m7b Disrupted HHHNA_16586_PROS1|NM_000313|exon_CDS|-4.35905974532479|2.37792830641145

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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