SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_000287
Gene Symbol: PEX6
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.42964849C>G COSM1546255 TCGA-91-6830-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-936 cTCTACTGTctctgc ACAGUAGA m8a (m7a->m8a) HHFKP_122742_cluster-19921_2_8
hsa-miR-4524a-3p ctctaCTGTCTCtgc UGAGACAG m7b Created HHFKP_122742_cluster-19921_2_8
hsa-miR-4645-3p ctcTACTGTCTctgc AGACAGUA m8a Created HHFKP_122742_cluster-19921_2_8

Mutation Mutation ID Sample Name Cancer Type
chr6:g.42964847C>G COSM451484 TCGA-A8-A09M-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 ctactCTGTCTGctc CCAGACAG m7b Created HHFKP_122742_cluster-19921_2_8
hsa-miR-3166 ctactcTGTCTGCtc CGCAGACA m7b Created HHFKP_122742_cluster-19921_2_8
hsa-miR-4797-5p ctACTCTGTCtgctc GACAGAGU m8a Created HHFKP_122742_cluster-19921_2_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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