SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000286
Gene Symbol: PEX12
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.35577927C>T COSM185193 TCGA-AA-A00E-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181b-3p atgacagCAGTGAGa CUCACUGA m7a Disrupted HHKTA_45750_NM_000286|684|723|1.60091381891501|0.234911655695555
hsa-miR-181b-2-3p atgacagCAGTGAGa CUCACUGA m7a Disrupted HHKTA_45750_NM_000286|684|723|1.60091381891501|0.234911655695555
hsa-miR-626 atGACAGCagtgaga AGCUGUCU m6b Disrupted HHKTA_45750_NM_000286|684|723|1.60091381891501|0.234911655695555
hsa-miR-6773-3p aTGACAGTagtgaga ACUGUCAC m7a Created HHKTA_45750_NM_000286|684|723|1.60091381891501|0.234911655695555
hsa-miR-6890-3p atgacaGCAGTGaga CCACUGCC m6b Disrupted HHKTA_45750_NM_000286|684|723|1.60091381891501|0.234911655695555
hsa-miR-1304-3p atgacagCAGTGAGa UCUCACUG m7b Disrupted HHKTA_45750_NM_000286|684|723|1.60091381891501|0.234911655695555

Mutation Mutation ID Sample Name Cancer Type
chr17:g.35577921G>T COSM977990 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1304-3p gCAGTGAGAcccgct UCUCACUG m8a (m8a->m7a) HHKTA_45750_NM_000286|684|723|1.60091381891501|0.234911655695555
hsa-miR-34c-3p gcAGTGATacccgct AAUCACUA m6b Created HHKTA_45750_NM_000286|684|723|1.60091381891501|0.234911655695555
hsa-miR-3621 gcagtgaGACCCGCt CGCGGGUC m7b Disrupted HHKTA_45750_NM_000286|684|723|1.60091381891501|0.234911655695555

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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