SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000270
Gene Symbol: PNP
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20476449C>T COSM2029178 TCGA-BQ-7051-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr14:g.20474905G>T COSM552361 TCGA-05-4390-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-624-3p cctACCTTGTttcag CACAAGGU m7b Created HPRO6_23987_G28125.1_20943055

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20474899C>T COSM3885798 TCGA-EE-A3J7-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-382-5p tatCAACTTacctgg GAAGUUGU m6b Created HPRO6_23987_G28125.1_20943055
hsa-miR-563 taTCAACCTacctgg AGGUUGAC m7a (m7a->m6a) HPRO6_23987_G28125.1_20943055
hsa-miR-495-5p tatCAACTTacctgg GAAGUUGC m6b Created HPRO6_23987_G28125.1_20943055

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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