SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000270
Gene Symbol: PNP
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20476449C>T COSM2029178 TCGA-BQ-7051-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr14:g.20476432G>A COSM4556756 CT-TC [soft_tissue][striated_muscle][rhabdomyosarcoma][embryonal]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4432 ggacttcGAGTCTTt AAAGACUC m7b Disrupted HHKTA_25367_NM_000270|839|878|2.94221999151948|5.57299421872465
hsa-miR-4635 ggaCTTCAAGtcttt UCUUGAAG m7b Created HHKTA_25367_NM_000270|839|878|2.94221999151948|5.57299421872465
hsa-miR-573 ggACTTCAagtcttt CUGAAGUG m6b Created HHKTA_25367_NM_000270|839|878|2.94221999151948|5.57299421872465
hsa-miR-8087 ggacttcAAGTCTTt GAAGACUU m7b Created HHKTA_25367_NM_000270|839|878|2.94221999151948|5.57299421872465

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20476431C>T COSM459205 TCGA-DR-A0ZM-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3973 tggACTTTGagtctt ACAAAGUA m6b Created HHKTA_25367_NM_000270|839|878|2.94221999151948|5.57299421872465
hsa-miR-520g-3p tggACTTTGagtctt ACAAAGUG m6b Created HHKTA_25367_NM_000270|839|878|2.94221999151948|5.57299421872465
hsa-miR-520h tggACTTTGagtctt ACAAAGUG m6b Created HHKTA_25367_NM_000270|839|878|2.94221999151948|5.57299421872465
hsa-miR-6507-3p tGGACTTTGagtctt CAAAGUCC m8a (m7a->m8a) HHKTA_25367_NM_000270|839|878|2.94221999151948|5.57299421872465
hsa-miR-888-5p tggacTTTGAGTctt UACUCAAA m7b Created HHKTA_25367_NM_000270|839|878|2.94221999151948|5.57299421872465

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20475116G>A COSM3494707 TCGA-ER-A193-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-1-3p tgaggcaAAGGGCTc AAGCCCUU m7b Created HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465
hsa-miR-129-2-3p tgaggcaAAGGGCTc AAGCCCUU m7b Created HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465
hsa-miR-2276-5p tgaggCAGAGGGCtc GCCCUCUG m8a Disrupted HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465
hsa-miR-3121-5p tgagGCAAAGGgctc UCCUUUGC m7b Created HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465
hsa-miR-3152-5p tGAGGCAAagggctc AUUGCCUC m7b Created HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465
hsa-miR-4687-5p tgaggcaGAGGGCTc CAGCCCUC m7b Disrupted HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465
hsa-miR-4774-3p tgAGGCAAagggctc AUUGCCUA m6b Created HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465
hsa-miR-5001-3p tgAGGCAGAgggctc UUCUGCCU m7b (m7b->m6b) HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20475111A>C COSM2029173 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5001-3p gactatgAGGCAGAg UUCUGCCU m7b Disrupted HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20475102C>T COSM3494706 TCGA-FR-A3YN-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6723-5p ctacgacCGGACTAt AUAGUCCG m7b Disrupted HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20475091A>T COSM1290271 CLL074 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-196a-3p atgtcTGTTGCCtac CGGCAACA m7b Created HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465
hsa-miR-4711-5p atgtCTGATGCctac UGCAUCAG m7b Disrupted HHKTA_40689_NM_000270|636|675|1.90378940627731|5.57299421872465

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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