SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000270
Gene Symbol: PNP
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.20476502TGAA>T COSM1262633 ESO-580 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-758-5p cCAACCATgaagaagtct GAUGGUUG m7b Disrupted HHHNA_6682_PNP|NM_000270|exon_CDS|-5.25070598714306|0.00926267312706525
hsa-miR-218-2-3p ccAACCATGaagaagtct CAUGGUUC m7a (m7a->m6a) HHHNA_6682_PNP|NM_000270|exon_CDS|-5.25070598714306|0.00926267312706525

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20476501A>G COSM4716212 T3658 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-758-5p gcCAACCATgaagaa GAUGGUUG m7b (m7b->m6b) HHHNA_6682_PNP|NM_000270|exon_CDS|-5.25070598714306|0.00926267312706525
hsa-miR-6837-3p gccaaccGTGAAGaa CCUUCACU m6b Created HHHNA_6682_PNP|NM_000270|exon_CDS|-5.25070598714306|0.00926267312706525
hsa-miR-6754-3p gccaaccGTGAAGAa UCUUCACC m7a Created HHHNA_6682_PNP|NM_000270|exon_CDS|-5.25070598714306|0.00926267312706525
hsa-miR-412-3p gccaaccGTGAAGaa ACUUCACC m6b Created HHHNA_6682_PNP|NM_000270|exon_CDS|-5.25070598714306|0.00926267312706525
hsa-miR-218-2-3p gccAACCATGaagaa CAUGGUUC m7a Disrupted HHHNA_6682_PNP|NM_000270|exon_CDS|-5.25070598714306|0.00926267312706525

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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