SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000270
Gene Symbol: PNP
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.20475116G>A COSM3494707 TCGA-ER-A193-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4687-5p tgaggcaGAGGGCTc CAGCCCUC m7b Disrupted HHFKP_44769_cluster-6302_4_30
hsa-miR-4774-3p tgAGGCAAagggctc AUUGCCUA m6b Created HHFKP_44769_cluster-6302_4_30
hsa-miR-5001-3p tgAGGCAGAgggctc UUCUGCCU m7b (m7b->m6b) HHFKP_44769_cluster-6302_4_30
hsa-miR-3152-5p tGAGGCAAagggctc AUUGCCUC m7b Created HHFKP_44769_cluster-6302_4_30
hsa-miR-129-1-3p tgaggcaAAGGGCTc AAGCCCUU m7b Created HHFKP_44769_cluster-6302_4_30
hsa-miR-129-2-3p tgaggcaAAGGGCTc AAGCCCUU m7b Created HHFKP_44769_cluster-6302_4_30
hsa-miR-2276-5p tgaggCAGAGGGCtc GCCCUCUG m8a Disrupted HHFKP_44769_cluster-6302_4_30
hsa-miR-3121-5p tgagGCAAAGGgctc UCCUUUGC m7b Created HHFKP_44769_cluster-6302_4_30

Mutation Mutation ID Sample Name Cancer Type
chr14:g.20475111A>C COSM2029173 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5001-3p gactatgAGGCAGAg UUCUGCCU m7b Disrupted HHFKP_44769_cluster-6302_4_30

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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