SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000262
Gene Symbol: NAGA
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.42068505G>A COSM4166726 7 [breast][NS][carcinoma_in_situ][ductal_and_lobular_carcinoma_in_situ]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3194-5p cccatgGGCTGGCtg GGCCAGCC m7b Disrupted HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-455-3p cccaTGGACTGgctg GCAGUCCA m7b Created HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-4641 ccCATGGGCtggctg UGCCCAUG m7b (m7b->m6b) HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-4676-5p cccatggACTGGCTg GAGCCAGU m7b Created HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-4690-3p cccaTGGGCTGgctg GCAGCCCA m7b Disrupted HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-5685 cccaTGGGCTGgctg ACAGCCCA m7b Disrupted HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-575 cccatggACTGGCTg GAGCCAGU m7b Created HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-6858-3p cccatggGCTGGCTg CAGCCAGC m7b Disrupted HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225

Mutation Mutation ID Sample Name Cancer Type
chr22:g.42068503T>G COSM4904880 TCGA-BF-A3DL-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7108-3p catGGGCGGGctggc ACCCGCCC m7b Created HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-6858-3p catggGCTGGCTGgc CAGCCAGC m8a Disrupted HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-3194-5p catgGGCTGGCtggc GGCCAGCC m7b Disrupted HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-4690-3p caTGGGCTGgctggc GCAGCCCA m7b (m7b->m6b) HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-4707-3p catgGGCGGGCTggc AGCCCGCC m8a Created HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-5685 caTGGGCTGgctggc ACAGCCCA m7b (m7b->m6b) HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225

Mutation Mutation ID Sample Name Cancer Type
chr22:g.42068488C>T COSM1535403 TCGA-69-7980-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1179 ctggGAATGCTTccg AAGCAUUC m8a Created HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225
hsa-miR-6828-5p ctgggaaTGCTTCCg AGGAAGCA m7b Created HHKTA_30840_NM_000262|628|667|2.4230046988984|0.562649804445225

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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