SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000262
Gene Symbol: NAGA
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.42068549G>T COSM3061580 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5589-3p tggccCATGTGCtga UGCACAUG m7b Created HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-4717-3p tggcCCATGTGctga ACACAUGG m7b Created HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-3065-3p tggcccaGGTGCTGa UCAGCACC m7b Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-939-3p tgGCCCAGGtgctga CCCUGGGC m7b (m7b->m6b) HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-7851-3p tggCCCAGGTgctga UACCUGGG m7b Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-6871-3p tggcccaGGTGCTGa CAGCACCC m7a Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-6804-3p tggccCAGGTGCtga CGCACCUG m7b Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-6765-3p tggcCCAGGTGctga UCACCUGG m7b Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736

Mutation Mutation ID Sample Name Cancer Type
chr22:g.42068545C>T COSM4104539 TCGA-B7-5816-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6871-3p ccaGGTGCTGatgct CAGCACCC m7a Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-6871-3p ccaGGTGCTGatgct CAGCACCC m7a Disrupted HHHNA_15844_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-6804-3p cCAGGTGCtgatgct CGCACCUG m7b Disrupted HHHNA_15844_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-4711-5p ccaggtgCTGATGCt UGCAUCAG m7b Disrupted HHHNA_15844_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-383-3p ccagGTGCTGatgct ACAGCACU m6b Disrupted HHHNA_15844_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-3617-3p ccaggTGCTGATGct CAUCAGCA m8a Disrupted HHHNA_15844_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-3065-3p ccaGGTGCTGAtgct UCAGCACC m8a Disrupted HHHNA_15844_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-21-3p ccaGGTGTTGatgct CAACACCA m7a Created HHHNA_15844_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-3617-3p ccaggTGCTGATGct CAUCAGCA m8a Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-6804-3p cCAGGTGCtgatgct CGCACCUG m7b Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-4711-5p ccaggtgCTGATGCt UGCAUCAG m7b Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-383-3p ccagGTGCTGatgct ACAGCACU m6b Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-3065-3p ccaGGTGCTGAtgct UCAGCACC m8a Disrupted HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736
hsa-miR-21-3p ccaGGTGTTGatgct CAACACCA m7a Created HHHNA_15845_NAGA|NM_000262|exon_CDS|-5.20450797376477|0.325850736680736

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser