SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000237
Gene Symbol: LPL
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.19967202A>C COSN8518660 422_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-128-3p cgtacttCACTGTGt UCACAGUG m7b Created HHFKP_141381_uc003wzk.2_30_1066
hsa-miR-216a-3p cgtacttCACTGTGt UCACAGUG m7b Created HHFKP_141381_uc003wzk.2_30_1066
hsa-miR-3681-3p cgtacttCACTGTGt ACACAGUG m7b Created HHFKP_141381_uc003wzk.2_30_1066
hsa-miR-548ao-5p cgTACTTCactgtgt AGAAGUAA m6b Created HHFKP_141381_uc003wzk.2_30_1066
hsa-miR-548ax cgTACTTCactgtgt AGAAGUAA m6b Created HHFKP_141381_uc003wzk.2_30_1066
hsa-miR-5585-5p cGTACTTCActgtgt UGAAGUAC m8a (m7a->m8a) HHFKP_141381_uc003wzk.2_30_1066

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19967162T>C COSN6918811 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-433-3p tcactcTCATGAaat AUCAUGAU m6b Created HHFKP_141381_uc003wzk.2_30_1066
hsa-miR-4693-3p tCACTCTCAtgaaat UGAGAGUG m8a (m7a->m8a) HHFKP_141381_uc003wzk.2_30_1066
hsa-miR-4712-3p tcaCTCTCATgaaat AAUGAGAG m7b Created HHFKP_141381_uc003wzk.2_30_1066
hsa-miR-7154-5p tcactcTCATGAAat UUCAUGAA m7a Created HHFKP_141381_uc003wzk.2_30_1066

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19966634G>T COSN9259307 C0065T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3160-5p ctAGAAAGCtctgca GGCUUUCU m7b (m7b->m6b) HHFKP_141375_uc003wzk.2_22_46
hsa-miR-3919 ctagaaaTCTCTGCa GCAGAGAA m7a Created HHFKP_141375_uc003wzk.2_22_46
hsa-miR-4756-3p ctagaaATCTCTGca CCAGAGAU m7b Created HHFKP_141375_uc003wzk.2_22_46

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19954329G>A COSM3898687 TCGA-BR-8078-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3186-3p tatCCGCGTGAttgc UCACGCGG m8a Disrupted HHFKP_141362_uc003wzk.2_6_41
hsa-miR-4705 tatccgcGTGATTGc UCAAUCAC m7b Disrupted HHFKP_141362_uc003wzk.2_6_41

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19954326C>T COSM1097857 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3186-3p agctatCCGCGTGAt UCACGCGG m8a Disrupted HHFKP_141362_uc003wzk.2_6_41

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19954321C>T COSM486286 TCGA-CZ-5466-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p ggAGAAGCTatccgc AGCUUCUU m7a (m7a->m6a) HHFKP_141362_uc003wzk.2_6_41

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19954315G>A COSM334836 LUAD-B01811 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p aacattgAAGAAGCt AGCUUCUU m7b Created HHFKP_141362_uc003wzk.2_6_41
hsa-miR-4778-3p aacattGAAGAAGct UCUUCUUC m7b Created HHFKP_141362_uc003wzk.2_6_41
hsa-miR-515-5p aacaTTGGAGAAgct UUCUCCAA m8a Disrupted HHFKP_141362_uc003wzk.2_6_41
hsa-miR-519d-5p aacaTTGGAGaagct CCUCCAAA m6b Disrupted HHFKP_141362_uc003wzk.2_6_41
hsa-miR-519e-5p aacaTTGGAGAAgct UUCUCCAA m8a Disrupted HHFKP_141362_uc003wzk.2_6_41
hsa-miR-5695 aacaTTGGAGaagct ACUCCAAG m6b Disrupted HHFKP_141362_uc003wzk.2_6_41
hsa-miR-676-5p aacaTTGAAGAagct UCUUCAAC m7a Created HHFKP_141362_uc003wzk.2_6_41

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19953338T>C COSM1256657 ESO-027 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1256 gaCAATGCCcatctc AGGCAUUG m7b (m6b->m7b) HHFKP_141361_uc003wzk.2_5_294
hsa-miR-3945 gacaATGCCCatctc AGGGCAUA m6b Created HHFKP_141361_uc003wzk.2_5_294
hsa-miR-4253 gacaATGCCCatctc AGGGCAUG m6b Created HHFKP_141361_uc003wzk.2_5_294
hsa-miR-6862-5p gacaATGCCCatctc CGGGCAUG m6b Created HHFKP_141361_uc003wzk.2_5_294

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19953331G>A COSM750140 TCGA-18-3409-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-198 cccTCTGGACaatgt GGUCCAGA m7b Disrupted HHFKP_141361_uc003wzk.2_5_294
hsa-miR-3912-5p ccctcTGGACAatgt AUGUCCAU m6b Disrupted HHFKP_141361_uc003wzk.2_5_294
hsa-miR-4257 cCCTCTGGacaatgt CCAGAGGU m7a Disrupted HHFKP_141361_uc003wzk.2_5_294
hsa-miR-520a-5p ccCTCTGGAcaatgt CUCCAGAG m7b (m7b->m6b) HHFKP_141361_uc003wzk.2_5_294
hsa-miR-525-5p ccCTCTGGAcaatgt CUCCAGAG m7b (m7b->m6b) HHFKP_141361_uc003wzk.2_5_294
Mutation Mutation ID Sample Name Cancer Type
chr8:g.19953320A>C COSM1097852 TCGA-BG-A0M8-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr8:g.19951832G>C COSM162208 PD4203a [NS][NS][NS][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-122-5p agaaccACACTCCAa UGGAGUGU m8a Created HHFKP_141360_uc003wzk.2_4_52
hsa-miR-1273g-5p agAACCACactccaa GGUGGUUG m6b Created HHFKP_141360_uc003wzk.2_4_52
hsa-miR-1289 agaaccaGACTCCAa UGGAGUCC m7a Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-203a-5p aGAACCACactccaa AGUGGUUC m7b Created HHFKP_141360_uc003wzk.2_4_52
hsa-miR-3198 agaaccaGACTCCAa GUGGAGUC m7b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-4294 agaaccAGACTCCaa GGGAGUCU m7b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-4309 agaaccaGACTCCAa CUGGAGUC m7b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-504-3p agaaccaCACTCCaa GGGAGUGC m6b Created HHFKP_141360_uc003wzk.2_4_52
hsa-miR-574-5p agaacCACACTCcaa UGAGUGUG m7b Created HHFKP_141360_uc003wzk.2_4_52

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19951826G>T COSM275892 TCGA-AA-A00N-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-152-5p caagagAGAACCaga AGGUUCUG m6b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-2117 caagAGAGAACcaga UGUUCUCU m7b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-3675-3p caAGAGATaaccaga CAUCUCUA m6b Created HHFKP_141360_uc003wzk.2_4_52
hsa-miR-4768-5p caaGAGAGAAccaga AUUCUCUC m7b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-487a-5p caagagATAACCAga GUGGUUAU m7b Created HHFKP_141360_uc003wzk.2_4_52
hsa-miR-487b-5p caagagATAACCAga GUGGUUAU m7b Created HHFKP_141360_uc003wzk.2_4_52
hsa-miR-597-3p caagaGAGAACCAga UGGUUCUC m8a Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-6817-3p caAGAGAGAaccaga UCUCUCUG m7a (m7a->m6a) HHFKP_141360_uc003wzk.2_4_52
hsa-miR-6833-3p caaGAGAGAAccaga UUUCUCUC m7b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-6873-3p caAGAGAGAAccaga UUCUCUCU m8a Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-7110-3p caAGAGAGAaccaga UCUCUCUC m7a (m7a->m6a) HHFKP_141360_uc003wzk.2_4_52

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19951822G>T COSM1097851 2296_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4768-5p tgtacaaGAGAGAAc AUUCUCUC m7b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-643 tgTACAAGagagaac ACUUGUAU m6b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-6817-3p tgtacaAGAGAGAac UCUCUCUG m7a Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-6833-3p tgtacaaGAGAGAAc UUUCUCUC m7b Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-6873-3p tgtacaAGAGAGAAc UUCUCUCU m8a Disrupted HHFKP_141360_uc003wzk.2_4_52
hsa-miR-7110-3p tgtacaAGAGAGAac UCUCUCUC m7a Disrupted HHFKP_141360_uc003wzk.2_4_52

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19948308A>T COSM2785102 HT55 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1301-3p tcacAGCTGCAAaac UUGCAGCU m8a Created HHFKP_141359_uc003wzk.2_3_79
hsa-miR-4660 tcacAGCTGCAaaac UGCAGCUC m7a Created HHFKP_141359_uc003wzk.2_3_79
hsa-miR-5047 tcacAGCTGCAAaac UUGCAGCU m8a Created HHFKP_141359_uc003wzk.2_3_79
hsa-miR-557 tcacagcTGCAAAac GUUUGCAC m6b Created HHFKP_141359_uc003wzk.2_3_79
hsa-miR-6516-5p tcacagCTGCAAAac UUUGCAGU m7a Created HHFKP_141359_uc003wzk.2_3_79
hsa-miR-6885-3p tcacagcAGCAAAac CUUUGCUU m6b Disrupted HHFKP_141359_uc003wzk.2_3_79
hsa-miR-7156-3p tcacaGCTGCAaaac CUGCAGCC m6b Created HHFKP_141359_uc003wzk.2_3_79

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19948266G>A COSM604968 ESO-081 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-204-3p caTTCCCAGagtagc GCUGGGAA m7b (m6b->m7b) HHFKP_141358_uc003wzk.2_2_62
hsa-miR-326 cattCCCAGAGtagc CCUCUGGG m7b Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-330-5p cattCCCAGAGtagc UCUCUGGG m7b Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-3664-5p cattccCAGAGTagc AACUCUGU m6b Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-4314 catTCCCAGAGtagc CUCUGGGA m8a Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-4497 catTCCCGGAGtagc CUCCGGGA m8a Disrupted HHFKP_141358_uc003wzk.2_2_62
hsa-miR-4646-5p caTTCCCAGagtagc ACUGGGAA m7b (m6b->m7b) HHFKP_141358_uc003wzk.2_2_62
hsa-miR-4714-5p cattccCAGAGTagc AACUCUGA m6b Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-514a-5p cattcCCAGAGTAgc UACUCUGG m8a Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-619-5p catTCCCAGagtagc GCUGGGAU m6b Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-6506-5p catTCCCAGagtagc ACUGGGAU m6b Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-6716-5p CATTCCCAgagtagc UGGGAAUG m8a Created HHFKP_141358_uc003wzk.2_2_62

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19948259C>G COSM750142 TCGA-66-2773-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-3p gcCACCTGattcccg ACAGGUGA m6b Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-6134 gCCACCTCAttcccg UGAGGUGG m8a (m8a->m7a) HHFKP_141358_uc003wzk.2_2_62
hsa-miR-6716-5p gccacctCATTCCCg UGGGAAUG m7b Disrupted HHFKP_141358_uc003wzk.2_2_62
hsa-miR-764 gcCACCTGattcccg GCAGGUGC m6b Created HHFKP_141358_uc003wzk.2_2_62

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19948237C>T COSM454274 TCGA-E2-A14V-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4711-3p gAAGACACagctgag CGUGUCUU m7b Disrupted HHFKP_141358_uc003wzk.2_2_62
hsa-miR-511-5p gAAGACACagctgag GUGUCUUU m7a Disrupted HHFKP_141358_uc003wzk.2_2_62

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19948233G>T COSM2785099 HT115 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-223-5p ccctgAATACACagc CGUGUAUU m7b Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-4711-3p ccctgAAGACACagc CGUGUCUU m7b Disrupted HHFKP_141358_uc003wzk.2_2_62
hsa-miR-506-5p cCCTGAATAcacagc UAUUCAGG m8a (m7a->m8a) HHFKP_141358_uc003wzk.2_2_62
hsa-miR-511-5p ccctgAAGACACagc GUGUCUUU m7a Disrupted HHFKP_141358_uc003wzk.2_2_62
hsa-miR-630 ccctGAATACacagc AGUAUUCU m6b Created HHFKP_141358_uc003wzk.2_2_62

Mutation Mutation ID Sample Name Cancer Type
chr8:g.19948226C>A COSM604969 TCGA-44-6778-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-3p taaggaCACCTGaag ACAGGUGA m6b Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-3127-5p taaggacCCCTGAag AUCAGGGC m6b Disrupted HHFKP_141358_uc003wzk.2_2_62
hsa-miR-3934-5p taaggACACCTGAag UCAGGUGU m8a Created HHFKP_141358_uc003wzk.2_2_62
hsa-miR-615-5p taaGGACCCCtgaag GGGGGUCC m7b Disrupted HHFKP_141358_uc003wzk.2_2_62
hsa-miR-6798-5p taaggaCCCCTGaag CCAGGGGG m6b Disrupted HHFKP_141358_uc003wzk.2_2_62
hsa-miR-764 taaggaCACCTGaag GCAGGUGC m6b Created HHFKP_141358_uc003wzk.2_2_62

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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