SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000232
Gene Symbol: SGCB
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033501G>A COSM1720397 1_RESISTANT [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p gggttgaGAGGAAGa CUUCCUCG m7a Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-1305 ggGTTGAAAggaaga UUUUCAAC m7b (m6b->m7b) HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-3183 gggttGAGAGGaaga GCCUCUCU m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-4723-3p gggttGAGAGGaaga CCCUCUCU m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-6769b-3p gggttGAGAGGaaga CCCUCUCU m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-6780a-3p gggttgAGAGGAaga CUCCUCUG m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-6881-3p gggttgAGAGGAaga AUCCUCUU m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-7111-3p gggttGAGAGGAaga AUCCUCUC m7b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033499G>A COSM372263 LUAD-NYU263 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1238-3p gttgaGAGGAAGaaa CUUCCUCG m7a Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-3183 gttGAGAGGaagaaa GCCUCUCU m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-4659a-3p gttgagaAGAAGAAa UUUCUUCU m7b Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-4659b-3p gttgagaAGAAGAAa UUUCUUCU m7b Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-4723-3p gttGAGAGGaagaaa CCCUCUCU m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-4778-3p gttgaGAAGAAGAaa UCUUCUUC m8a Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-6769b-3p gttGAGAGGaagaaa CCCUCUCU m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-6780a-3p gttgAGAGGAagaaa CUCCUCUG m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-6875-3p gttgagaGGAAGAAa AUUCUUCC m7b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-6881-3p gttgAGAGGAagaaa AUCCUCUU m6b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-7111-3p gttGAGAGGAagaaa AUCCUCUC m7b Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-942-5p gttGAGAAGAagaaa UCUUCUCU m7a Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033486A>G COSM1618890 HCC70T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-18a-3p aAGGGCAGTttagcc ACUGCCCU m8a (m7a->m8a) HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-548av-3p aaggGCAGTTTagcc AAAACUGC m7b Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-548g-3p aagggCAGTTTagcc AAAACUGU m6b Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033482A>G COSM3380939 PCSI_0083_Pa_X [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3926 gcaaTTTGGCCAtct UGGCCAAA m8a Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-548s gcaatTTGGCCATct AUGGCCAA m8a Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033474G>T COSM256100 TCGA-AF-3913-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-377-3p gccatcTGTGTGATt AUCACACA m8a Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-4426 gCCATCTTtgtgatt GAAGAUGG m7b Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-4647 gCCATCTTtgtgatt GAAGAUGG m7b Created HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-4662b gCCATCTTTgtgatt AAAGAUGG m8a (m7a->m8a) HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-5683 gcCATCTGTgtgatt UACAGAUG m7b (m7b->m6b) HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569
hsa-miR-6768-5p gccatCTGTGTGatt CACACAGG m7a Disrupted HHKTA_49379_NM_000232|225|264|1.38457411365623|0.410399389966569

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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