SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000232 |
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Gene Symbol: | SGCB |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr4:g.52033552TTTAA>A | COSM290078 | TCGA-AG-A014-01 | [large_intestine][rectum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4453 | cagtaaCAAGCTgga | GAGCUUGG | m6b | Created | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |
hsa-miR-4538 | cagtaaCAAGCTgga | GAGCUUGG | m6b | Created | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |
hsa-miR-548at-5p | cagTAACTTTaaagctgga | AAAAGUUA | m7b | Disrupted | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |
hsa-miR-561-3p | cagtAACTTTaaagctgga | CAAAGUUU | m6b | Disrupted | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr4:g.52033546G>T | COSM447922 | TCGA-BH-A0HN-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3713 | aaagctGGATACatt | GGUAUCCG | m6b | Disrupted | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |
hsa-let-7f-2-3p | aaagCTGTATAcatt | CUAUACAG | m7b | Created | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |
hsa-miR-1185-1-3p | aaagCTGTATAcatt | AUAUACAG | m7b | Created | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |
hsa-miR-1185-2-3p | aaagCTGTATAcatt | AUAUACAG | m7b | Created | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |
hsa-miR-4789-5p | aaagcTGTATACatt | GUAUACAC | m7a | Created | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |
hsa-miR-5586-5p | aaaGCTGGATAcatt | UAUCCAGC | m8a | Disrupted | HHHNA_17369_SGCB|NM_000232|exon_CDS|-5.21439954837568|1.32279265144973 |