SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000232
Gene Symbol: SGCB
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033633C>T COSM1055924 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4738-3p caaAGTTTCAatggt UGAAACUG m7a Created HHFKP_106558_cluster-17587_8_30
hsa-miR-510-3p caaaGTTTCAATggt AUUGAAAC m8a Created HHFKP_106558_cluster-17587_8_30

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033607C>A COSM1671020 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1304-3p gtccatgAGTGAGAa UCUCACUG m7a Created HHFKP_106558_cluster-17587_8_30
hsa-miR-6794-3p gtccatGAGTGAGaa CUCACUCU m7a Created HHFKP_106558_cluster-17587_8_30

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033580G>A COSM258680 TCGA-AG-3896-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3117-5p aaggAGTGTCaataa AGACACUA m6b Disrupted HHFKP_106557_cluster-17587_7_8
hsa-miR-514a-3p aaggaGTGTCAATaa AUUGACAC m8a Disrupted HHFKP_106557_cluster-17587_7_8
hsa-miR-514b-3p aaggaGTGTCAATaa AUUGACAC m8a Disrupted HHFKP_106557_cluster-17587_7_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033552TTTAA>A COSM290078 TCGA-AG-A014-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4453 cagtaaCAAGCTgga GAGCUUGG m6b Created HHFKP_106556_cluster-17587_6_20
hsa-miR-4538 cagtaaCAAGCTgga GAGCUUGG m6b Created HHFKP_106556_cluster-17587_6_20
hsa-miR-548at-5p cagTAACTTTaaagctgga AAAAGUUA m7b Disrupted HHFKP_106556_cluster-17587_6_20
hsa-miR-561-3p cagtAACTTTaaagctgga CAAAGUUU m6b Disrupted HHFKP_106556_cluster-17587_6_20

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52033546G>T COSM447922 TCGA-BH-A0HN-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7f-2-3p aaagCTGTATAcatt CUAUACAG m7b Created HHFKP_106556_cluster-17587_6_20
hsa-miR-1185-1-3p aaagCTGTATAcatt AUAUACAG m7b Created HHFKP_106556_cluster-17587_6_20
hsa-miR-1185-2-3p aaagCTGTATAcatt AUAUACAG m7b Created HHFKP_106556_cluster-17587_6_20
hsa-miR-3713 aaagctGGATACatt GGUAUCCG m6b Disrupted HHFKP_106556_cluster-17587_6_20
hsa-miR-4789-5p aaagcTGTATACatt GUAUACAC m7a Created HHFKP_106556_cluster-17587_6_20
hsa-miR-5586-5p aaaGCTGGATAcatt UAUCCAGC m8a Disrupted HHFKP_106556_cluster-17587_6_20

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52028054C>T COSM1429990 TCGA-G4-6628-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-585-5p tgatgggTGTGCTAt CUAGCACA m7b Created HHFKP_106555_cluster-17587_5_8
hsa-miR-8064 tgatggGTGTGCTat AGCACACU m7a Created HHFKP_106555_cluster-17587_5_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52028041G>T COSM734219 TCGA-22-5473-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3692-3p attgtgcGTGGAAat GUUCCACA m6b Disrupted HHFKP_106555_cluster-17587_5_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52028038G>C COSM221379 DLBCL-PatientH [haematopoietic_and_lymphoid_tissue][lymph_node][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3692-3p gtgcGTGGAAatgaa GUUCCACA m6b Disrupted HHFKP_106555_cluster-17587_5_8
hsa-miR-507 gtgcGTGCAAAtgaa UUUUGCAC m7b Created HHFKP_106555_cluster-17587_5_8
hsa-miR-557 gtgcGTGCAAAtgaa GUUUGCAC m7b Created HHFKP_106555_cluster-17587_5_8
hsa-miR-579-3p gtgcgtgCAAATGAa UUCAUUUG m7b Created HHFKP_106555_cluster-17587_5_8
hsa-miR-664b-3p gtgcgtgCAAATGAa UUCAUUUG m7b Created HHFKP_106555_cluster-17587_5_8

Mutation Mutation ID Sample Name Cancer Type
chr4:g.52023633G>T COSN207324
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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