SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000186
Gene Symbol: CFH
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.196726591G>A COSM3480811 TCGA-EE-A2MJ-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-204-5p ttctaatAAAGGGAc UUCCCUUU m7b Created HHFKP_13908_cluster-951_13_6
hsa-miR-205-5p ttctaATGAAGGgac UCCUUCAU m7b Disrupted HHFKP_13908_cluster-951_13_6
hsa-miR-211-5p ttctaatAAAGGGAc UUCCCUUU m7b Created HHFKP_13908_cluster-951_13_6
hsa-miR-6832-3p ttctaatAAAGGGac ACCCUUUU m6b Created HHFKP_13908_cluster-951_13_6

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196726581G>A COSM4533464 CSCC-47-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-32-3p aatcCTAAATTtcta CAAUUUAG m7b Created HHFKP_13908_cluster-951_13_6
hsa-miR-651-5p aATCCTAAAtttcta UUUAGGAU m8a (m7a->m8a) HHFKP_13908_cluster-951_13_6

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196726580A>G COSM4026517 TCGA-HU-A4G9-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-665 caaTCCTGGatttct ACCAGGAG m6b Created HHFKP_13908_cluster-951_13_6

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196726573C>T COSM169876 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p attATTGCAatccta CUGCAAUG m6b Disrupted HHFKP_13908_cluster-951_13_6
hsa-miR-3159 attattgTAATCCTa UAGGAUUA m7b Created HHFKP_13908_cluster-951_13_6
hsa-miR-338-5p atTATTGTaatccta AACAAUAU m6b Created HHFKP_13908_cluster-951_13_6

Mutation Mutation ID Sample Name Cancer Type
chr1:g.196673901A>G COSM4764259 pfg127T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548aj-5p taCTTTTGCccttac UGCAAAAG m7b (m6b->m7b) HHFKP_13897_cluster-951_1_7
hsa-miR-548f-5p taCTTTTGCccttac UGCAAAAG m7b (m6b->m7b) HHFKP_13897_cluster-951_1_7
hsa-miR-548g-5p taCTTTTGCccttac UGCAAAAG m7b (m6b->m7b) HHFKP_13897_cluster-951_1_7
hsa-miR-548x-5p taCTTTTGCccttac UGCAAAAG m7b (m6b->m7b) HHFKP_13897_cluster-951_1_7

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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