SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000168
Gene Symbol: GLI3
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.41965032G>C COSM1253302 ESO-167 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-455-5p ttgGGCACATtagtg UAUGUGCC m7b Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-8066 ttgggCACATTagtg CAAUGUGA m6b Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556

Mutation Mutation ID Sample Name Cancer Type
chr7:g.41965018C>A COSM3880988 TCGA-BR-6457-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-5p gCTACCTCAcacatc UGAGGUAG m8a (m8a->m7a) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-let-7b-5p gCTACCTCAcacatc UGAGGUAG m8a (m8a->m7a) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-let-7c-5p gCTACCTCAcacatc UGAGGUAG m8a (m8a->m7a) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-let-7e-5p gCTACCTCAcacatc UGAGGUAG m8a (m8a->m7a) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-let-7f-5p gCTACCTCAcacatc UGAGGUAG m8a (m8a->m7a) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-let-7g-5p gCTACCTCAcacatc UGAGGUAG m8a (m8a->m7a) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-let-7i-5p gCTACCTCAcacatc UGAGGUAG m8a (m8a->m7a) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-1258 gctaCCTAACacatc AGUUAGGA m6b Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-1294 gctACCTCACAcatc UGUGAGGU m8a Disrupted HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-196a-5p gCTACCTAacacatc UAGGUAGU m7a Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-196b-5p gCTACCTAacacatc UAGGUAGU m7a Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-3152-3p gctacCTAACACAtc UGUGUUAG m8a Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-4316 gctaCCTCACacatc GGUGAGGC m6b Disrupted HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-4500 gCTACCTCAcacatc UGAGGUAG m8a (m8a->m7a) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-6509-5p gcTACCTAAcacatc AUUAGGUA m7b (m6b->m7b) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-6818-5p gctaccTCACACAtc UUGUGUGA m7b Disrupted HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-6831-5p gCTACCTAacacatc UAGGUAGA m7a Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-98-5p gCTACCTCAcacatc UGAGGUAG m8a (m8a->m7a) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556

Mutation Mutation ID Sample Name Cancer Type
chr7:g.41965012T>C COSM374568 LUAD-NYU408 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3650 tcACACACCaacatc AGGUGUGU m7b (m6b->m7b) HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-4781-3p tcacacaCCAACATc AAUGUUGG m7b Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-6867-5p tCACACACcaacatc UGUGUGUG m7b Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556

Mutation Mutation ID Sample Name Cancer Type
chr7:g.41965004T>C COSM3950510 742_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3165 caacATCCACCaagg AGGUGGAU m7b Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-3529-5p caacaTCTACCaagg AGGUAGAC m6b Disrupted HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-3691-5p caaCATCCACcaagg AGUGGAUG m7b Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-376a-2-5p caacATCTACCaagg GGUAGAUU m7a Disrupted HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-376c-5p caacATCCACCaagg GGUGGAUA m7a Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-379-5p caacaTCTACCAagg UGGUAGAC m7a Disrupted HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-4451 caacaTCTACCAagg UGGUAGAG m7a Disrupted HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-4650-3p caacaTCTACCaagg AGGUAGAA m6b Disrupted HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-576-3p caACATCTaccaagg AAGAUGUG m6b Disrupted HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-6880-5p caacaTCCACCAagg UGGUGGAG m7a Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556
hsa-miR-8071 caacaTCCACCaagg CGGUGGAC m6b Created HHKTA_25129_NM_000168|4127|4166|2.94221999151948|0.137034348050556

Mutation Mutation ID Sample Name Cancer Type
chr7:g.41964348C>T COSM4397412 TCGA-EE-A3JD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4708-3p gcaaattCCTTGCag AGCAAGGC m6b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-6830-5p gcaaaTTCCTTGcag CCAAGGAA m7b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556

Mutation Mutation ID Sample Name Cancer Type
chr7:g.41964347C>A COSM3880984 TCGA-F1-6874-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106a-3p caaattCATTGCAGt CUGCAAUG m8a Created HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-2276-3p caaattcCTTGCAGt UCUGCAAG m7b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-4708-3p caaattCCTTGCagt AGCAAGGC m6b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-6830-5p caaaTTCCTTGcagt CCAAGGAA m7b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556

Mutation Mutation ID Sample Name Cancer Type
chr7:g.41964336G>T COSM3431599 TCGA-EI-6514-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-3p cagttaTGCAATagg CAUUGCAC m6b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-363-3p cagttaTGCAATagg AAUUGCAC m6b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-367-3p cagttaTGCAATagg AAUUGCAC m6b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-5585-3p cagtTATTCAatagg CUGAAUAG m6b Created HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556

Mutation Mutation ID Sample Name Cancer Type
chr7:g.41964332T>C COSM3698389 TCGA-AZ-4615-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-3p taTGCAATaggcttt CAUUGCAC m6b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-363-3p taTGCAATaggcttt AAUUGCAC m6b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-367-3p taTGCAATaggcttt AAUUGCAC m6b Disrupted HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556
hsa-miR-367-5p tatGCAACAGgcttt ACUGUUGC m7b Created HHKTA_33621_NM_000168|4805|4844|2.20666499363961|0.137034348050556

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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