SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000143
Gene Symbol: FH
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.241500470C>G COSM1296079 TCGA-GV-A3JZ-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1303 tgagTCTCTAAtgtt UUUAGAGA m7b Disrupted HHFKP_7492_uc001hyx.1_3_24
hsa-miR-323a-3p tgagtctGTAATGTt CACAUUAC m7b Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-499b-5p tgAGTCTGTaatgtt ACAGACUU m7a (m6a->m7a) HHFKP_7492_uc001hyx.1_3_24
hsa-miR-6504-3p tgagtCTGTAATGtt CAUUACAG m8a Created HHFKP_7492_uc001hyx.1_3_24

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241500458A>G COSM1340610 TCGA-CM-4752-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-22-3p gttggtGGCAGCTct AAGCUGCC m7b Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-4715-3p gttGGTGGCAgctct GUGCCACC m7b Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-558 gttggtgGCAGCTCt UGAGCUGC m7b Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-6773-3p gttgGTGACAGctct ACUGUCAC m7b Disrupted HHFKP_7492_uc001hyx.1_3_24

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241500457C>A COSM1340609 TCGA-CM-6171-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-197-3p tTGGTGAAagctctc UUCACCAC m7a Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-5096 ttGGTGAAAgctctc GUUUCACC m7b (m6b->m7b) HHFKP_7492_uc001hyx.1_3_24
hsa-miR-6773-3p ttgGTGACAGctctc ACUGUCAC m7b Disrupted HHFKP_7492_uc001hyx.1_3_24

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241500456A>T COSM24358 NCI-H2087 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2278 tggtgaCTGCTCTCa GAGAGCAG m8a Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-4274 tggtGACTGCTctca CAGCAGUC m7b Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-4704-3p tgGTGACTGctctca UCAGUCAC m7b (m6b->m7b) HHFKP_7492_uc001hyx.1_3_24
hsa-miR-6773-3p tgGTGACAGctctca ACUGUCAC m7b (m7b->m6b) HHFKP_7492_uc001hyx.1_3_24

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241500456A>G COSM1560753 TCGA-EI-6507-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6773-3p tgGTGACAGctctca ACUGUCAC m7b (m7b->m6b) HHFKP_7492_uc001hyx.1_3_24

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241500448A>G COSM337661 LUAD-D01603 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-5p gctctcaATCCTCat AGAGGAUA m6b Disrupted HHFKP_7492_uc001hyx.1_3_24
hsa-miR-1224-5p gctctcaGTCCTCAt GUGAGGAC m7b Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-3169 gctctCAGTCCTcat UAGGACUG m7b Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-4461 gcTCTCAATCctcat GAUUGAGA m8a Disrupted HHFKP_7492_uc001hyx.1_3_24
hsa-miR-4740-5p gctcTCAGTCCTcat AGGACUGA m8a Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-4751 gctctcaGTCCTCat AGAGGACC m6b Created HHFKP_7492_uc001hyx.1_3_24
hsa-miR-6857-3p gctCTCAGTCctcat UGACUGAG m7b Created HHFKP_7492_uc001hyx.1_3_24

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241497902A>G COSM464229 TCGA-CZ-5461-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-196b-3p aactGCTGTCGAact UCGACAGC m8a Created HHFKP_7491_uc001hyx.1_2_178

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241497900C>T COSM4466935 CSCC-49-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6826-5p ctgCTATTGAacttg UCAAUAGG m7a Created HHFKP_7491_uc001hyx.1_2_178

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241497872T>C COSM3486120 TCGA-D9-A1JW-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548av-3p agaGCAGTTTgacga AAAACUGC m7b Disrupted HHFKP_7491_uc001hyx.1_2_178

Mutation Mutation ID Sample Name Cancer Type
chr1:g.241497867C>T COSM906401 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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