SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000107
Gene Symbol: DDB2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.47215233G>C COSM1298085 TCGA-BT-A20R-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6744-3p ggagcccGAGGCCaa GGGCCUCU m6b Disrupted HHHNE_4588_DDB2|NM_000107|exon_CDS|-4.92827307299292|2.48729201615526
hsa-miR-6735-3p ggagcccCAGGCCaa AGGCCUGU m6b Created HHHNE_4588_DDB2|NM_000107|exon_CDS|-4.92827307299292|2.48729201615526
hsa-miR-661 ggagcCCCAGGCcaa UGCCUGGG m7b Created HHHNE_4588_DDB2|NM_000107|exon_CDS|-4.92827307299292|2.48729201615526
hsa-miR-4757-5p ggagcccGAGGCCaa AGGCCUCU m6b Disrupted HHHNE_4588_DDB2|NM_000107|exon_CDS|-4.92827307299292|2.48729201615526
hsa-miR-6878-3p ggagcccGAGGCCAa CUGGCCUC m7b Disrupted HHHNE_4588_DDB2|NM_000107|exon_CDS|-4.92827307299292|2.48729201615526
hsa-miR-6852-5p ggagCCCCAGGccaa CCCUGGGG m7b Created HHHNE_4588_DDB2|NM_000107|exon_CDS|-4.92827307299292|2.48729201615526
hsa-miR-4283 gGAGCCCCAggccaa UGGGGCUC m8a (m7a->m8a) HHHNE_4588_DDB2|NM_000107|exon_CDS|-4.92827307299292|2.48729201615526
hsa-miR-3944-3p ggAGCCCGAggccaa UUCGGGCU m7b (m7b->m6b) HHHNE_4588_DDB2|NM_000107|exon_CDS|-4.92827307299292|2.48729201615526

Mutation Mutation ID Sample Name Cancer Type
chr11:g.47215179A>C COSM1981286 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-300 ctccgagCTTGTATt UAUACAAG m7b Created HHHNE_4587_DDB2|NM_000107|exon_CDS|-5.64025500403253|-1.4045770570359
hsa-miR-381-3p ctccgagCTTGTATt UAUACAAG m7b Created HHHNE_4587_DDB2|NM_000107|exon_CDS|-5.64025500403253|-1.4045770570359
hsa-miR-4666a-3p ctccgagATTGTATt CAUACAAU m7b Disrupted HHHNE_4587_DDB2|NM_000107|exon_CDS|-5.64025500403253|-1.4045770570359
hsa-miR-99a-3p ctcCGAGCTTGtatt CAAGCUCG m8a Created HHHNE_4587_DDB2|NM_000107|exon_CDS|-5.64025500403253|-1.4045770570359
hsa-miR-99b-3p ctcCGAGCTTGtatt CAAGCUCG m8a Created HHHNE_4587_DDB2|NM_000107|exon_CDS|-5.64025500403253|-1.4045770570359

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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