SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000098
Gene Symbol: CPT2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210729T>G COSM3997581 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1226-3p cGCTGGTGtgataaa UCACCAGC m7b Created HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-377-3p cgctgGTGTGATaaa AUCACACA m7a Created HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-497-3p cgcTGGTTTGataaa CAAACCAC m7a Disrupted HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-6715a-3p cgcTGGTTTGataaa CCAAACCA m7b Disrupted HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-6715b-3p cgctGGTTTGAtaaa CUCAAACC m7b Disrupted HHRBL_420_BCBL1-2of3-SCL_7879

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210723G>A COSM4387797 8066446 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-5p acaAACCACTGgttt CAGUGGUU m8a Created HHRBL_420_BCBL1-2of3-SCL_7879

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210714G>A COSM1343447 TCGA-F4-6703-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1227-3p ggggaTGGCACaaac CGUGCCAC m6b Disrupted HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-2113 ggggatgGCACAAAc AUUUGUGC m7b Disrupted HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-5010-3p ggggatgACACAAAc UUUUGUGU m7b Created HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-550b-2-5p ggggatGGCACAaac AUGUGCCU m6b Disrupted HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-592 ggggaTGACACAAac UUGUGUCA m8a Created HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-597-5p ggggaTGACACAaac UGUGUCAC m7a Created HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-599 ggggatGACACAAac GUUGUGUC m7b Created HHRBL_420_BCBL1-2of3-SCL_7879
hsa-miR-6729-3p GGGGATGAcacaaac UCAUCCCC m8a Created HHRBL_420_BCBL1-2of3-SCL_7879

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210360C>A COSM4674502 T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5087 ccCAAACCCagtcgg GGGUUUGU m7a (m7a->m6a) HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-6839-3p cccAAACCCAgtcgg UUGGGUUU m7b Disrupted HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-892a cccaaACACAGTcgg CACUGUGU m7b Created HHRBL_419_BCBL1-2of3-SCL_11972

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210347C>T COSM160190 PD4123a [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219a-1-3p cTCAACTCgtttacc AGAGUUGA m7b Disrupted HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-30a-5p ctcaactTGTTTACc UGUAAACA m7b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-30b-5p ctcaactTGTTTACc UGUAAACA m7b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-30c-5p ctcaactTGTTTACc UGUAAACA m7b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-30d-5p ctcaactTGTTTACc UGUAAACA m7b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-30e-5p ctcaactTGTTTACc UGUAAACA m7b Created HHRBL_419_BCBL1-2of3-SCL_11972

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210317T>C COSM1492128 TCGA-A3-3316-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1302 ggataTGTCCCAgta UUGGGACA m7b Disrupted HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-3945 ggaTATGCCCcagta AGGGCAUA m7b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-4298 ggataTGTCCCAGta CUGGGACA m8a Disrupted HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-4646-5p ggatatgTCCCAGTa ACUGGGAA m7a Disrupted HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-4667-5p ggatatgCCCCAGTa ACUGGGGA m7a Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-486-3p ggataTGCCCCagta CGGGGCAG m6b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-637 ggatatgCCCCAGTa ACUGGGGG m7a Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-6506-5p ggatatgTCCCAGTa ACUGGGAU m7a Disrupted HHRBL_419_BCBL1-2of3-SCL_11972

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210311G>C COSM4847814 TCGA-JW-A5VL-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4685-5p tcCCCTGGatatgtc CCCAGGGC m6b Disrupted HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-5580-3p tcccctgCATATGTc CACAUAUG m7b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-6132 tcCCCTGCatatgtc AGCAGGGC m6b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-6722-3p tCCCCTGCAtatgtc UGCAGGGG m8a (m7a->m8a) HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-6798-5p tCCCCTGGatatgtc CCAGGGGG m7a Disrupted HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-6811-5p tccCCTGCATatgtc AUGCAGGC m7a Created HHRBL_419_BCBL1-2of3-SCL_11972

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210300C>T COSM1667554 DLD1 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4643 gtcaATGTGTatccc GACACAUG m6b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-466 gtcaATGTGTATccc AUACACAU m8a Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-4789-3p gtcaATGTGTatccc CACACAUA m6b Created HHRBL_419_BCBL1-2of3-SCL_11972

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210297A>G COSM1474076 TCGA-D8-A1JH-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-106b-3p ctggtCAGTGCGtat CCGCACUG m7b Created HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-521 ctggtcAGTGCGTat AACGCACU m7b Created HHRBL_419_BCBL1-2of3-SCL_11972

Mutation Mutation ID Sample Name Cancer Type
chr1:g.53210284G>A COSM139287 cSCCP7 [skin][face][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3189-5p gtATGGGGCctacct UGCCCCAU m7b (m7b->m6b) HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-4747-3p gtatgGGGCCTacct AAGGCCCG m6b Disrupted HHRBL_419_BCBL1-2of3-SCL_11972
hsa-miR-874-5p gtaTGGGGCCtacct CGGCCCCA m7b Disrupted HHRBL_419_BCBL1-2of3-SCL_11972

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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