SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_000098 |
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Gene Symbol: | CPT2 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr1:g.53210735A>C | COSM191479 | TCGA-AA-3555-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1265 | tttgatACATCCTtt | CAGGAUGU | m7b | Created | HHKTA_4190_NM_000098|1562|1601|14.9274396628562|0.648968938659244 |
hsa-miR-3171 | tttgATACATCcttt | AGAUGUAU | m7b | Created | HHKTA_4190_NM_000098|1562|1601|14.9274396628562|0.648968938659244 |
hsa-miR-374a-3p | ttTGATAAatccttt | CUUAUCAG | m6b | Disrupted | HHKTA_4190_NM_000098|1562|1601|14.9274396628562|0.648968938659244 |
hsa-miR-541-5p | tttgataAATCCTTt | AAAGGAUU | m7b | Disrupted | HHKTA_4190_NM_000098|1562|1601|14.9274396628562|0.648968938659244 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.53210729T>G | COSM3997581 | SNUH_G76_S1 | [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-377-3p | cgctgGTGTGATaaa | AUCACACA | m7a | Created | HHKTA_4190_NM_000098|1562|1601|14.9274396628562|0.648968938659244 |
hsa-miR-497-3p | cgcTGGTTTGataaa | CAAACCAC | m7a | Disrupted | HHKTA_4190_NM_000098|1562|1601|14.9274396628562|0.648968938659244 |
hsa-miR-6715a-3p | cgcTGGTTTGataaa | CCAAACCA | m7b | Disrupted | HHKTA_4190_NM_000098|1562|1601|14.9274396628562|0.648968938659244 |
hsa-miR-6715b-3p | cgctGGTTTGAtaaa | CUCAAACC | m7b | Disrupted | HHKTA_4190_NM_000098|1562|1601|14.9274396628562|0.648968938659244 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.53210723G>A | COSM4387797 | 8066446 | [pancreas][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-140-5p | acaAACCACTGgttt | CAGUGGUU | m8a | Created | HHKTA_4190_NM_000098|1562|1601|14.9274396628562|0.648968938659244 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.53210360C>A | COSM4674502 | T3262 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-5087 | ccCAAACCCagtcgg | GGGUUUGU | m7a | (m7a->m6a) | HHKTA_49341_NM_000098|1165|1204|1.38457411365623|0.648968938659244 |
hsa-miR-6839-3p | cccAAACCCAgtcgg | UUGGGUUU | m7b | Disrupted | HHKTA_49341_NM_000098|1165|1204|1.38457411365623|0.648968938659244 |
hsa-miR-892a | cccaaACACAGTcgg | CACUGUGU | m7b | Created | HHKTA_49341_NM_000098|1165|1204|1.38457411365623|0.648968938659244 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr1:g.53210347C>T | COSM160190 | PD4123a | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-219a-1-3p | cTCAACTCgtttacc | AGAGUUGA | m7b | Disrupted | HHKTA_49341_NM_000098|1165|1204|1.38457411365623|0.648968938659244 |
hsa-miR-30a-5p | ctcaactTGTTTACc | UGUAAACA | m7b | Created | HHKTA_49341_NM_000098|1165|1204|1.38457411365623|0.648968938659244 |
hsa-miR-30b-5p | ctcaactTGTTTACc | UGUAAACA | m7b | Created | HHKTA_49341_NM_000098|1165|1204|1.38457411365623|0.648968938659244 |
hsa-miR-30c-5p | ctcaactTGTTTACc | UGUAAACA | m7b | Created | HHKTA_49341_NM_000098|1165|1204|1.38457411365623|0.648968938659244 |
hsa-miR-30d-5p | ctcaactTGTTTACc | UGUAAACA | m7b | Created | HHKTA_49341_NM_000098|1165|1204|1.38457411365623|0.648968938659244 |
hsa-miR-30e-5p | ctcaactTGTTTACc | UGUAAACA | m7b | Created | HHKTA_49341_NM_000098|1165|1204|1.38457411365623|0.648968938659244 |