SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000092
Gene Symbol: COL4A4
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr2:g.227089907G>T COSM1017302 TCGA-A5-A0GJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.227089896A>T COSM3962463 202_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1343-3p gtccCCCAGGAGgaa CUCCUGGG m8a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-1976 gtccccCAGGAGGaa CCUCCUGC m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-3653-5p gtccccCAGGAGGaa CCUCCUGA m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-4665-5p gTCCCCCAGgaggaa CUGGGGGA m8a (m8a->m7a) HHFKP_79715_cluster-14147_26_7
hsa-miR-4685-5p gtccCCCTGGaggaa CCCAGGGC m6b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-4691-5p gtcccccTGGAGGAa GUCCUCCA m7b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-4716-3p gTCCCCCTggaggaa AAGGGGGA m7b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-5193 gtcccccAGGAGGAa UCCUCCUC m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-637 gtCCCCCAGgaggaa ACUGGGGG m7b (m7b->m6b) HHFKP_79715_cluster-14147_26_7
hsa-miR-660-3p gtccccCAGGAGGaa ACCUCCUG m7b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6742-3p gtccCCCAGGaggaa ACCUGGGU m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6783-3p gtccCCCAGGAggaa UUCCUGGG m7b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6792-3p gtcccccTGGAGGAa CUCCUCCA m7b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-6794-5p gTCCCCCTGgaggaa CAGGGGGA m8a (m7a->m8a) HHFKP_79715_cluster-14147_26_7
hsa-miR-6798-5p gtCCCCCTGGaggaa CCAGGGGG m8a Created HHFKP_79715_cluster-14147_26_7
hsa-miR-6837-5p gtccCCCTGGaggaa ACCAGGGC m6b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-6852-5p gtcCCCCAGGaggaa CCCUGGGG m7b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-8089 gtcCCCCAGGaggaa CCUGGGGA m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-939-3p gtccCCCAGGaggaa CCCUGGGC m6b Disrupted HHFKP_79715_cluster-14147_26_7

Mutation Mutation ID Sample Name Cancer Type
chr2:g.227089895G>A COSM3578435 TCGA-EE-A29S-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1343-3p tccCCCAGGAGgaag CUCCUGGG m8a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-1976 tccccCAGGAGGaag CCUCCUGC m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-3653-5p tccccCAGGAGGaag CCUCCUGA m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-4260 tcCCCCAAGaggaag CUUGGGGC m7a (m6a->m7a) HHFKP_79715_cluster-14147_26_7
hsa-miR-4691-5p tcccccaGGAGGAag GUCCUCCA m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-5193 tcccccAGGAGGAag UCCUCCUC m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-635 tccCCCAAGaggaag ACUUGGGC m6b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-637 tCCCCCAGgaggaag ACUGGGGG m7b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-660-3p tccccCAGGAGGaag ACCUCCUG m7b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6742-3p tccCCCAGGaggaag ACCUGGGU m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6749-3p tcccccaGGAGGAag CUCCUCCC m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6774-5p tccCCCAAGaggaag ACUUGGGC m6b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-6780a-3p tcccccaAGAGGAag CUCCUCUG m6b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-6783-3p tccCCCAGGAggaag UUCCUGGG m7b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6792-3p tcccccaGGAGGAag CUCCUCCA m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6852-5p tcCCCCAGGaggaag CCCUGGGG m7b (m7b->m6b) HHFKP_79715_cluster-14147_26_7
hsa-miR-6881-3p tcccccAAGAGGAag AUCCUCUU m7b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-7111-3p tcccccaAGAGGAag AUCCUCUC m6b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-8089 tcCCCCAGGaggaag CCUGGGGA m7a (m7a->m6a) HHFKP_79715_cluster-14147_26_7
hsa-miR-877-3p tcccccAAGAGGAag UCCUCUUC m7a Created HHFKP_79715_cluster-14147_26_7
hsa-miR-939-3p tccCCCAGGaggaag CCCUGGGC m6b Disrupted HHFKP_79715_cluster-14147_26_7

Mutation Mutation ID Sample Name Cancer Type
chr2:g.227089891G>A COSM3578434 TCGA-EE-A2MS-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-3p ccaggaGGAAGAGGc CCUCUUCC m8a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-1238-3p ccagGAGGAAGaggc CUUCCUCG m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-130b-5p ccaggaGAAAGAGgc ACUCUUUC m7b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-1976 cCAGGAGGaagaggc CCUCCUGC m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-3653-5p cCAGGAGGaagaggc CCUCCUGA m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-4279 ccAGGAGAaagaggc CUCUCCUC m6b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-4691-5p ccaGGAGGAagaggc GUCCUCCA m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-5193 ccAGGAGGAagaggc UCCUCCUC m7a (m7a->m6a) HHFKP_79715_cluster-14147_26_7
hsa-miR-629-3p ccaGGAGAAagaggc GUUCUCCC m6b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-660-3p cCAGGAGGaagaggc ACCUCCUG m7b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6749-3p ccaGGAGGAagaggc CUCCUCCC m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6792-3p ccaGGAGGAagaggc CUCCUCCA m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-877-3p ccaggagGAAGAGGc UCCUCUUC m7b Disrupted HHFKP_79715_cluster-14147_26_7

Mutation Mutation ID Sample Name Cancer Type
chr2:g.227089883C>T COSM3757996 TCGA-AM-5821-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2114-3p aaGAGGCTCaaaagg CGAGCCUC m7b (m6b->m7b) HHFKP_79715_cluster-14147_26_7
hsa-miR-2861 aagAGGCCCaaaagg GGGGCCUG m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-4757-5p aAGAGGCCcaaaagg AGGCCUCU m7b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6724-5p aagaGGCCCAaaagg CUGGGCCC m6b Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6744-3p aAGAGGCCCaaaagg GGGCCUCU m8a (m8a->m7a) HHFKP_79715_cluster-14147_26_7
hsa-miR-6773-5p aagaGGCCCAAaagg UUGGGCCC m7a Disrupted HHFKP_79715_cluster-14147_26_7
hsa-miR-6807-5p aagaGGCTCAaaagg GUGAGCCA m6b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-6819-3p aAGAGGCTcaaaagg AAGCCUCU m7b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-6823-3p aaGAGGCTCAaaagg UGAGCCUC m8a Created HHFKP_79715_cluster-14147_26_7
hsa-miR-6877-3p aAGAGGCTcaaaagg CAGCCUCU m7b Created HHFKP_79715_cluster-14147_26_7
hsa-miR-8055 aagagGCTCAAAagg CUUUGAGC m7b Created HHFKP_79715_cluster-14147_26_7

Mutation Mutation ID Sample Name Cancer Type
chr2:g.227078053G>A COSM3727294 WM3211 [skin][ankle][malignant_melanoma][acral_lentiginous]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1255b-2-3p gaccccAAGTGGTaa AACCACUU m7b Created HHFKP_79714_cluster-14147_25_28
hsa-miR-3614-5p gaccCCAAGTGGtaa CCACUUGG m8a Created HHFKP_79714_cluster-14147_25_28
hsa-miR-5572 gACCCCAAgtggtaa GUUGGGGU m7b Created HHFKP_79714_cluster-14147_25_28
hsa-miR-6765-3p gaccCCAGGTGgtaa UCACCUGG m7b Disrupted HHFKP_79714_cluster-14147_25_28
hsa-miR-6852-5p gaCCCCAGGtggtaa CCCUGGGG m7b (m7b->m6b) HHFKP_79714_cluster-14147_25_28
hsa-miR-7851-3p gacCCCAGGTggtaa UACCUGGG m7b Disrupted HHFKP_79714_cluster-14147_25_28

Mutation Mutation ID Sample Name Cancer Type
chr2:g.227078049G>A COSM77507 TCGA-09-0364-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-374a-3p ccaggTGATAAagga CUUAUCAG m6b Created HHFKP_79714_cluster-14147_25_28
hsa-miR-6765-3p CCAGGTGAtaaagga UCACCUGG m8a Created HHFKP_79714_cluster-14147_25_28

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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