SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000054
Gene Symbol: AVPR2
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.153906310G>C COSM755729 TCGA-66-2773-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-128-3p tggccaaCACTGTGa UCACAGUG m7b Created HHFKP_155736_cluster-24135_2_8
hsa-miR-216a-3p tggccaaCACTGTGa UCACAGUG m7b Created HHFKP_155736_cluster-24135_2_8
hsa-miR-3681-3p tggccaaCACTGTGa ACACAGUG m7b Created HHFKP_155736_cluster-24135_2_8

Mutation Mutation ID Sample Name Cancer Type
chrX:g.153906304G>T COSM4107923 TCGA-BR-8363-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1271-5p cagctgtTGCCAAGa CUUGGCAC m7a Created HHFKP_155736_cluster-24135_2_8
hsa-miR-182-5p cagctgTTGCCAAga UUUGGCAA m7b Created HHFKP_155736_cluster-24135_2_8
hsa-miR-196a-3p cagcTGTTGCCaaga CGGCAACA m7b Created HHFKP_155736_cluster-24135_2_8
hsa-miR-4435 cagctgTGGCCAaga AUGGCCAG m6b Disrupted HHFKP_155736_cluster-24135_2_8
hsa-miR-4701-5p cagctGTGGCCAAga UUGGCCAC m8a Disrupted HHFKP_155736_cluster-24135_2_8
hsa-miR-548s cagctgTGGCCAaga AUGGCCAA m6b Disrupted HHFKP_155736_cluster-24135_2_8
hsa-miR-588 cagctGTGGCCAAga UUGGCCAC m8a Disrupted HHFKP_155736_cluster-24135_2_8

Mutation Mutation ID Sample Name Cancer Type
chrX:g.153906302G>T COSM1117643 TCGA-BS-A0V6-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-320a agCAGCTTTggccaa AAAAGCUG m7b (m6b->m7b) HHFKP_155736_cluster-24135_2_8
hsa-miR-320b agCAGCTTTggccaa AAAAGCUG m7b (m6b->m7b) HHFKP_155736_cluster-24135_2_8
hsa-miR-320c agCAGCTTTggccaa AAAAGCUG m7b (m6b->m7b) HHFKP_155736_cluster-24135_2_8
hsa-miR-320d agCAGCTTTggccaa AAAAGCUG m7b (m6b->m7b) HHFKP_155736_cluster-24135_2_8
hsa-miR-3926 agcagcTTTGGCCAa UGGCCAAA m8a Created HHFKP_155736_cluster-24135_2_8
hsa-miR-4429 agCAGCTTTggccaa AAAAGCUG m7b (m6b->m7b) HHFKP_155736_cluster-24135_2_8
hsa-miR-4701-5p agcagctGTGGCCAa UUGGCCAC m7b Disrupted HHFKP_155736_cluster-24135_2_8
hsa-miR-548s agcagctTTGGCCAa AUGGCCAA m7b Created HHFKP_155736_cluster-24135_2_8
hsa-miR-588 agcagctGTGGCCAa UUGGCCAC m7b Disrupted HHFKP_155736_cluster-24135_2_8

Mutation Mutation ID Sample Name Cancer Type
chrX:g.153906297C>T COSM3800487 TCGA-FJ-A3Z7-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5690 gtgtcaGTAGCTGtg UCAGCUAC m7b Created HHFKP_155736_cluster-24135_2_8
hsa-miR-628-5p gtGTCAGCAgctgtg AUGCUGAC m7b (m7b->m6b) HHFKP_155736_cluster-24135_2_8
hsa-miR-888-3p gTGTCAGTagctgtg GACUGACA m7b Created HHFKP_155736_cluster-24135_2_8
hsa-miR-93-3p gtgTCAGCAGctgtg ACUGCUGA m7b Disrupted HHFKP_155736_cluster-24135_2_8

Mutation Mutation ID Sample Name Cancer Type
chrX:g.153906290G>T COSM1557088 TCGA-69-7979-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6730-3p agcccacGTGTCAGc CCUGACAC m7b Disrupted HHFKP_155736_cluster-24135_2_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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