SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000046
Gene Symbol: ARSB
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.78798311A>G COSN4852036 tumor_4135350 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][Burkitt_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2682-3p gacAGAGGCagacca CGCCUCUU m6b Created HHFKP_114067_cluster-18634_14_7
hsa-miR-3120-5p gacagAGACAGacca CCUGUCUG m6b Disrupted HHFKP_114067_cluster-18634_14_7
hsa-miR-346 gacagaGGCAGACca UGUCUGCC m7b Created HHFKP_114067_cluster-18634_14_7
hsa-miR-4527 gacagagGCAGACCa UGGUCUGC m7b Created HHFKP_114067_cluster-18634_14_7
hsa-miR-5001-3p gacagAGGCAGAcca UUCUGCCU m7b Created HHFKP_114067_cluster-18634_14_7
hsa-miR-593-3p gaCAGAGACAgacca UGUCUCUG m8a Disrupted HHFKP_114067_cluster-18634_14_7
hsa-miR-6503-5p gacagagGCAGACCa AGGUCUGC m7b Created HHFKP_114067_cluster-18634_14_7
hsa-miR-6753-3p gacagagACAGACCa UGGUCUGU m7b Disrupted HHFKP_114067_cluster-18634_14_7
hsa-miR-6818-3p gacAGAGACAgacca UUGUCUCU m7b Disrupted HHFKP_114067_cluster-18634_14_7
hsa-miR-6888-3p gacagAGACAGAcca AUCUGUCU m7b Disrupted HHFKP_114067_cluster-18634_14_7
hsa-miR-7107-3p gacagagACAGACCa UGGUCUGU m7b Disrupted HHFKP_114067_cluster-18634_14_7

Mutation Mutation ID Sample Name Cancer Type
chr5:g.78780597AC>C COSM391181 LUAD-B02216 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1275 cagaCCCCCAaccaa GUGGGGGA m6b Created HHFKP_114066_cluster-18634_13_14
hsa-miR-4260 cagacCCCCAAccaa CUUGGGGC m6b Created HHFKP_114066_cluster-18634_13_14
hsa-miR-450a-2-3p cagacCCCCAAccaa AUUGGGGA m6b Created HHFKP_114066_cluster-18634_13_14
hsa-miR-4665-5p cagaCCCCCAaccaa CUGGGGGA m6b Created HHFKP_114066_cluster-18634_13_14
hsa-miR-541-3p cagaCCCACCAaccaa UGGUGGGC m7a Disrupted HHFKP_114066_cluster-18634_13_14
hsa-miR-654-5p cagaCCCACCAaccaa UGGUGGGC m7a Disrupted HHFKP_114066_cluster-18634_13_14
hsa-miR-6751-5p cagACCCCCAAccaa UUGGGGGU m8a Created HHFKP_114066_cluster-18634_13_14
hsa-miR-6769a-5p cagACCCACCaaccaa AGGUGGGU m7b Disrupted HHFKP_114066_cluster-18634_13_14
hsa-miR-6769b-5p cagACCCACCAaccaa UGGUGGGU m8a Disrupted HHFKP_114066_cluster-18634_13_14
hsa-miR-6803-5p cagACCCCCAaccaa CUGGGGGU m7b Created HHFKP_114066_cluster-18634_13_14
hsa-miR-6842-5p cagACCCCCAaccaa UGGGGGUG m7a Created HHFKP_114066_cluster-18634_13_14
hsa-miR-7109-5p cagaCCCCCAaccaa CUGGGGGG m6b Created HHFKP_114066_cluster-18634_13_14
hsa-miR-7110-5p cagACCCCCAaccaa UGGGGGUG m7a Created HHFKP_114066_cluster-18634_13_14
hsa-miR-92a-1-5p cagaccCCCAACCaa AGGUUGGG m7b Created HHFKP_114066_cluster-18634_13_14
hsa-miR-92a-2-5p cagaCCCACCaaccaa GGGUGGGG m6b Disrupted HHFKP_114066_cluster-18634_13_14

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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