SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000037
Gene Symbol: ANK1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.41660488C>T COSN524473 TCGA-AN-A04A-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4508 agctGCCCCGaggcc GCGGGGCU m6b Disrupted HPHES_8154_G10868.1_41518013
hsa-miR-1827 agCTGCCTCgaggcc UGAGGCAG m7b (m6b->m7b) HPHES_8154_G10868.1_41518013
hsa-miR-5090 agcTGCCCCGaggcc CCGGGGCA m7b Disrupted HPHES_8154_G10868.1_41518013
hsa-miR-6775-5p agcTGCCCCGAggcc UCGGGGCA m8a Disrupted HPHES_8154_G10868.1_41518013
hsa-miR-486-3p agCTGCCCCGaggcc CGGGGCAG m8a Disrupted HPHES_8154_G10868.1_41518013
hsa-miR-6727-5p agctGCCCCGAGgcc CUCGGGGC m8a Disrupted HPHES_8154_G10868.1_41518013

Mutation Mutation ID Sample Name Cancer Type
chr8:g.41660458G>T COSN524472 TCGA-AR-A1AX-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5090 ctgagcTGCCCCGag CCGGGGCA m7b Disrupted HPHES_8001_G10639.1_41517972
hsa-miR-486-3p ctgagCTGCCCCGag CGGGGCAG m8a Disrupted HPHES_8001_G10639.1_41517972
hsa-miR-4725-3p ctgagCTTCCCCgag UGGGGAAG m7b Created HPHES_8001_G10639.1_41517972
hsa-miR-4660 ctGAGCTGCcccgag UGCAGCUC m7b (m7b->m6b) HPHES_8001_G10639.1_41517972
hsa-miR-4508 ctgagctGCCCCGag GCGGGGCU m6b Disrupted HPHES_8001_G10639.1_41517972
hsa-miR-4271 ctgagCTTCCCCgag GGGGGAAG m7b Created HPHES_8001_G10639.1_41517972
hsa-miR-3928-5p ctGAGCTTCcccgag UGAAGCUC m7b (m6b->m7b) HPHES_8001_G10639.1_41517972
hsa-miR-6775-5p ctgagcTGCCCCGAg UCGGGGCA m8a Disrupted HPHES_8001_G10639.1_41517972
hsa-miR-6854-5p CTGAGCTTccccgag AAGCUCAG m8a Created HPHES_8001_G10639.1_41517972
hsa-miR-6806-3p ctGAGCTTCcccgag UGAAGCUC m7b (m6b->m7b) HPHES_8001_G10639.1_41517972
hsa-miR-6780b-5p ctgagCTTCCCCgag UGGGGAAG m7b Created HPHES_8001_G10639.1_41517972
hsa-miR-6777-5p ctgagctTCCCCGag ACGGGGAG m6b Created HPHES_8001_G10639.1_41517972
hsa-miR-6727-5p ctgagctGCCCCGAg CUCGGGGC m7b Disrupted HPHES_8001_G10639.1_41517972

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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