SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_014643
Gene Symbol: ZNF516
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.76406777A>G COSN7351091 8044424 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-3p tgCTGTGGTggtgag UACCACAG m7b (m6b->m7b) HHFKP_66972_cluster-11084_6_8
hsa-miR-197-3p tgctgtgGTGGTGAg UUCACCAC m7b Created HHFKP_66972_cluster-11084_6_8
hsa-miR-6884-3p tgctGTGATGGtgag CCCAUCAC m7b Disrupted HHFKP_66972_cluster-11084_6_8
Mutation Mutation ID Sample Name Cancer Type
chr18:g.76405366A>T COSN1209557 HCC78T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr18:g.76405353G>T COSN1209556 HCC85T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4310 gggtggATGCTGagg GCAGCAUU m6b Created HHFKP_66970_cluster-11084_4_14
hsa-miR-6877-3p gggtgGAGGCTGagg CAGCCUCU m7a Disrupted HHFKP_66970_cluster-11084_4_14

Mutation Mutation ID Sample Name Cancer Type
chr18:g.76362531C>A COSM3527671 TCGA-D3-A51G-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1269a caggtaCAGTCCAGa CUGGACUG m8a Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-1269b caggtaCAGTCCAGa CUGGACUG m8a Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378a-3p caggtacAGTCCAGa ACUGGACU m7b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378b caggtacAGTCCAGa ACUGGACU m7b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378c caggtacAGTCCAGa ACUGGACU m7b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378d caggtacAGTCCAGa ACUGGACU m7b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378e caggtacAGTCCAGa ACUGGACU m7b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378f caggtacAGTCCAGa ACUGGACU m7b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378h caggtacAGTCCAGa ACUGGACU m7b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378i caggtacAGTCCAGa ACUGGACU m7b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-422a caggtacAGTCCAGa ACUGGACU m7b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-4515 caggtaCAGTCCaga AGGACUGG m6b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-4740-5p caggtaCAGTCCaga AGGACUGA m6b Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-4804-5p caggtaCCGTCCAga UUGGACGG m7b Disrupted HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-8058 caggtacAGTCCAGa CUGGACUU m7a Created HHHNE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-1269a caggtaCAGTCCAGa CUGGACUG m8a Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-1269b caggtaCAGTCCAGa CUGGACUG m8a Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378a-3p caggtacAGTCCAGa ACUGGACU m7b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378b caggtacAGTCCAGa ACUGGACU m7b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378c caggtacAGTCCAGa ACUGGACU m7b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378d caggtacAGTCCAGa ACUGGACU m7b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378e caggtacAGTCCAGa ACUGGACU m7b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378f caggtacAGTCCAGa ACUGGACU m7b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378h caggtacAGTCCAGa ACUGGACU m7b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-378i caggtacAGTCCAGa ACUGGACU m7b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-422a caggtacAGTCCAGa ACUGGACU m7b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-4515 caggtaCAGTCCaga AGGACUGG m6b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-4740-5p caggtaCAGTCCaga AGGACUGA m6b Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-4804-5p caggtaCCGTCCAga UUGGACGG m7b Disrupted HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085
hsa-miR-8058 caggtacAGTCCAGa CUGGACUU m7a Created HHHSE_22189_ZNF516|NM_014643|exon_CDS|-5.35787420393566|-1.24230651999085

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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