SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099639
Gene Symbol: ZNF146

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236879G>C COSM130359 HN_63058 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3192-3p tgagcATCAGAaaat CUCUGAUC m6b Created HPRT3_12655_G16758.1_36727770
hsa-miR-4502 tgagCATCAGaaaat GCUGAUGA m6b Created HPRT3_12655_G16758.1_36727770
hsa-miR-4762-3p tgagcATCAGAAaat CUUCUGAU m7b Created HPRT3_12655_G16758.1_36727770
Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236878T>C COSM4077350 TCGA-BR-7707-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr19:g.36236738T>A COSM4570622 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-888-5p aaaacctTTTGAGTg UACUCAAA m7b Disrupted HPRT3_12654_G16757.1_36727622
hsa-miR-371b-5p aaaaccTTTTGAGTg ACUCAAAA m8a Disrupted HPRT3_12654_G16757.1_36727622
hsa-miR-373-5p aaaaccTTTTGAGTg ACUCAAAA m8a Disrupted HPRT3_12654_G16757.1_36727622
hsa-miR-616-5p aaaaccTTTTGAGTg ACUCAAAA m8a Disrupted HPRT3_12654_G16757.1_36727622
hsa-miR-6826-5p aaaaCCTATTGAgtg UCAAUAGG m8a Created HPRT3_12654_G16757.1_36727622

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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