SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0029680
Gene Symbol: XPO4
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.20862746C>T COSM3467648 TCGA-D3-A1Q6-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-3p gaACATTCCttttaa UGGAAUGU m7b (m7b->m6b) HPSEF_6525_G7817.1_21436874
hsa-miR-206 gaACATTCCttttaa UGGAAUGU m7b (m7b->m6b) HPSEF_6525_G7817.1_21436874
hsa-miR-5680 gaaCATTTCTtttaa GAGAAAUG m7b Created HPSEF_6525_G7817.1_21436874
hsa-miR-613 gaACATTCCTtttaa AGGAAUGU m8a Disrupted HPSEF_6525_G7817.1_21436874
hsa-miR-1-3p gaACATTCCttttaa UGGAAUGU m7b (m7b->m6b) HPSEF_6525_G7817.1_21436874
hsa-miR-206 gaACATTCCttttaa UGGAAUGU m7b (m7b->m6b) HPSEF_6525_G7817.1_21436874
hsa-miR-5680 gaaCATTTCTtttaa GAGAAAUG m7b Created HPSEF_6525_G7817.1_21436874
hsa-miR-613 gaACATTCCTtttaa AGGAAUGU m8a Disrupted HPSEF_6525_G7817.1_21436874

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20862745C>T COSM4485131 CSCC-57-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-186-5p aacATTCTTTttaac CAAAGAAU m7b Created HPSEF_6525_G7817.1_21436874
hsa-miR-206 aACATTCCttttaac UGGAAUGU m7b Disrupted HPSEF_6525_G7817.1_21436874
hsa-miR-613 aACATTCCTtttaac AGGAAUGU m8a (m8a->m7a) HPSEF_6525_G7817.1_21436874
hsa-miR-1-3p aACATTCCttttaac UGGAAUGU m7b Disrupted HPSEF_6525_G7817.1_21436874
hsa-miR-186-5p aacATTCTTTttaac CAAAGAAU m7b Created HPSEF_6525_G7817.1_21436874
hsa-miR-206 aACATTCCttttaac UGGAAUGU m7b Disrupted HPSEF_6525_G7817.1_21436874
hsa-miR-613 aACATTCCTtttaac AGGAAUGU m8a (m8a->m7a) HPSEF_6525_G7817.1_21436874
Mutation Mutation ID Sample Name Cancer Type
chr13:g.20855699A>G COSM4046421 TCGA-BR-7851-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr13:g.20842948G>A COSM945925 TCGA-CD-A4MG-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-5p tttcAGCATTAcctt UUAAUGCU m7b Created HHKTA_40536_NM_022459|684|723|1.90378940627731|0.241462771508176
hsa-miR-4728-3p ttTCAGCATtacctt CAUGCUGA m7b (m6b->m7b) HHKTA_40536_NM_022459|684|723|1.90378940627731|0.241462771508176
hsa-miR-155-5p tttcAGCATTAcctt UUAAUGCU m7b Created HHKTA_40536_NM_022459|684|723|1.90378940627731|0.241462771508176
hsa-miR-4728-3p ttTCAGCATtacctt CAUGCUGA m7b (m6b->m7b) HHKTA_40536_NM_022459|684|723|1.90378940627731|0.241462771508176

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20827110G>A COSM4999589 PDA_032 [pancreas][NS][carcinoma][ductal_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1976 tcctgGCAGGAGact CCUCCUGC m7b Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-3653-5p tcctggCAGGAGact CCUCCUGA m6b Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-4258 tccTGGCGGGagact CCCCGCCA m7b Disrupted HHFCT_39963_uc001unq.2_34_12
hsa-miR-4722-3p tccTGGCAGGagact ACCUGCCA m7b Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-5006-5p tCCTGGCAggagact UUGCCAGG m7b Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-6727-3p tccTGGCAGGAgact UCCUGCCA m8a Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-7108-3p tcctGGCGGGagact ACCCGCCC m6b Disrupted HHFCT_39963_uc001unq.2_34_12
hsa-miR-1976 tcctgGCAGGAGact CCUCCUGC m7b Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-3653-5p tcctggCAGGAGact CCUCCUGA m6b Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-4258 tccTGGCGGGagact CCCCGCCA m7b Disrupted HHFCT_39963_uc001unq.2_34_12
hsa-miR-4722-3p tccTGGCAGGagact ACCUGCCA m7b Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-5006-5p tCCTGGCAggagact UUGCCAGG m7b Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-6727-3p tccTGGCAGGAgact UCCUGCCA m8a Created HHFCT_39963_uc001unq.2_34_12
hsa-miR-7108-3p tcctGGCGGGagact ACCCGCCC m6b Disrupted HHFCT_39963_uc001unq.2_34_12

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20822190G>T COSM182696 TCGA-AA-A01P-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p agATGAAGGAtcaca UCCUUCAU m8a Disrupted HHFCT_39960_uc001unq.2_31_6
hsa-miR-382-3p agatGAATGATcaca AAUCAUUC m7b Created HHFCT_39960_uc001unq.2_31_6

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20822157G>A COSM1270606 ESO-1594 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-5p cttcattAAGGGATt CAUCCCUU m7b Created HHFCT_39959_uc001unq.2_30_12
hsa-miR-6866-3p cttcattAAGGGATt GAUCCCUU m7b Created HHFCT_39959_uc001unq.2_30_12
hsa-miR-188-5p cttcattAAGGGATt CAUCCCUU m7b Created HHFCT_39959_uc001unq.2_30_12
hsa-miR-6866-3p cttcattAAGGGATt GAUCCCUU m7b Created HHFCT_39959_uc001unq.2_30_12

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20822140T>C COSM4046407 TCGA-HU-A4G9-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8069 tgaatACCATCaatg GGAUGGUU m6b Created HHFCT_39959_uc001unq.2_30_12
hsa-miR-8069 tgaatACCATCaatg GGAUGGUU m6b Created HHFCT_39959_uc001unq.2_30_12

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20821773C>A COSM1365785 TCGA-D5-6930-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1185-5p aactttTATCCTCct AGAGGAUA m7b Created HHFKP_38589_uc001unq.2_24_12
hsa-miR-3150b-3p aactttTCTCCTCct UGAGGAGA m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-3679-5p aactttTATCCTCct UGAGGAUA m7b Created HHFKP_38589_uc001unq.2_24_12
hsa-miR-4784 aactttTCTCCTCct UGAGGAGA m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-6894-5p aacttttATCCTCCt AGGAGGAU m7b Created HHFKP_38589_uc001unq.2_24_12
hsa-miR-765 aacttttCTCCTCCt UGGAGGAG m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-1185-5p aactttTATCCTCct AGAGGAUA m7b Created HHFKP_38589_uc001unq.2_24_12
hsa-miR-3150b-3p aactttTCTCCTCct UGAGGAGA m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-3679-5p aactttTATCCTCct UGAGGAUA m7b Created HHFKP_38589_uc001unq.2_24_12
hsa-miR-4784 aactttTCTCCTCct UGAGGAGA m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-6894-5p aacttttATCCTCCt AGGAGGAU m7b Created HHFKP_38589_uc001unq.2_24_12
hsa-miR-765 aacttttCTCCTCCt UGGAGGAG m7b Disrupted HHFKP_38589_uc001unq.2_24_12

Mutation Mutation ID Sample Name Cancer Type
chr13:g.20821768C>T COSM4459039 CSCC-11-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3150b-3p tTCTCCTCctttgtt UGAGGAGA m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-3173-3p ttctCCTCCTTTgtt AAAGGAGG m8a Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-4428 tTCTCCTTctttgtt CAAGGAGA m7b Created HHFKP_38589_uc001unq.2_24_12
hsa-miR-4784 tTCTCCTCctttgtt UGAGGAGA m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-6891-5p ttctCCTCCTTtgtt UAAGGAGG m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-765 ttCTCCTCCtttgtt UGGAGGAG m7b (m7b->m6b) HHFKP_38589_uc001unq.2_24_12
hsa-miR-3150b-3p tTCTCCTCctttgtt UGAGGAGA m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-3173-3p ttctCCTCCTTTgtt AAAGGAGG m8a Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-4428 tTCTCCTTctttgtt CAAGGAGA m7b Created HHFKP_38589_uc001unq.2_24_12
hsa-miR-4784 tTCTCCTCctttgtt UGAGGAGA m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-6891-5p ttctCCTCCTTtgtt UAAGGAGG m7b Disrupted HHFKP_38589_uc001unq.2_24_12
hsa-miR-765 ttCTCCTCCtttgtt UGGAGGAG m7b (m7b->m6b) HHFKP_38589_uc001unq.2_24_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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